ggKbase home page

SCNpilot_BF_INOC_scaffold_65

Search features with annotation key words

Displaying items 211-240 of 243 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_65_211
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(243292..244713)
DNA (1422bp) protein (474aa)
Na+/proline symporter id=7717915 bin=BACIGN_2 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Na+/proline symporter Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Na+/proline symporter
SCNpilot_BF_INOC_scaffold_65_212
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(244674..245279)
DNA (606bp) protein (202aa)
RNase HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=7717914 bin=BACIGN_2 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP
Ribonuclease H (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RBG_13_Caldithrix_44_9_curated
RNase HII (EC:3.1.26.4)
SCNpilot_BF_INOC_scaffold_65_213
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(245292..246044)
DNA (753bp) protein (251aa)
folE; putative GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16] id=7717913 bin=BACIGN_2 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=BACIGN_2 organism_group=Unknown_CP
GTP cyclohydrolase i (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
GTP cyclohydrolase I
SCNpilot_BF_INOC_scaffold_65_214
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(246041..246535)
DNA (495bp) protein (165aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] id=7717912 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_65_215
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

246634..247449
DNA (816bp) protein (272aa)
id=7717911 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7717911 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
SCNpilot_BF_INOC_scaffold_65_216
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

247467..249980
DNA (2514bp) protein (838aa)
Organic solvent tolerance protein OstA id=7717910 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Organic solvent tolerance protein OstA Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Organic solvent tolerance protein OstA
SCNpilot_BF_INOC_scaffold_65_217
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

250039..251874
DNA (1836bp) protein (612aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] id=7717909 bin=BACIGN_2 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=BACIGN_2 organism_group=Unknown_CP
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
SCNpilot_BF_INOC_scaffold_65_218
uncultured alpha proteobacterium, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

251886..252881
DNA (996bp) protein (332aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] id=7717908 bin=BACIGN_2 species=uncultured alpha proteobacterium genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
Arginine/ornithine transport system ATPase {ECO:0000313|EMBL:BAL56491.1}; TaxID=91750 species="Bacteria; Proteobacteria; Alphaproteobacteria; environmental samples.;" source="uncultured alpha proteoba
LAO/AO transport system ATPase
SCNpilot_BF_INOC_scaffold_65_219
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

252878..254089
DNA (1212bp) protein (404aa)
peptidase M24 id=7717907 bin=BACIGN_2 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=BACIGN_2 organism_group=Unknown_CP
Xaa-Pro aminopeptidase Tax=GWA2_Ignavibacteriae_55_25_curated
peptidase M24
SCNpilot_BF_INOC_scaffold_65_220
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

254086..255894
DNA (1809bp) protein (603aa)
Tetratricopeptide repeat domain protein id=7717906 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_65_221
Bacillus badius, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

255941..257659
DNA (1719bp) protein (573aa)
oligoendopeptidase F id=7717905 bin=BACIGN_2 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
Oligoendopeptidase F {ECO:0000313|EMBL:KIL80390.1}; TaxID=1455 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus badius.;"
oligoendopeptidase F
SCNpilot_BF_INOC_scaffold_65_222
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

257792..261847
DNA (4056bp) protein (1352aa)
hypothetical protein id=7717904 bin=BACIGN_2 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RIF_IGX_33_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_65_223
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

261917..265798
DNA (3882bp) protein (1294aa)
glucose/sorbosone dehydrogenase-related id=7717903 bin=BACIGN_2 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
PDK repeat-containing protein
SCNpilot_BF_INOC_scaffold_65_224
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

265852..266838
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase id=7717902 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
NAD-dependent epimerase/dehydratase
Tax=GWF2_RIF_IGX_33_9_curated
SCNpilot_BF_INOC_scaffold_65_225
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

266829..269324
DNA (2496bp) protein (832aa)
Penicillin amidase; K01434 penicillin amidase [EC:3.5.1.11] id=7717901 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
penicillin amidase
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_65_226
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

269398..270888
DNA (1491bp) protein (497aa)
leucyl aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1] id=7717900 bin=BACIGN_2 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=BACIGN_2 organism_group=Unknown_CP
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=GWA2_Ignavibacteria_54_16_curated
leucyl aminopeptidase (EC:3.4.11.1)
SCNpilot_BF_INOC_scaffold_65_227
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

271134..271727
DNA (594bp) protein (198aa)
alkyl hydroperoxide reductase id=7717899 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
Thiol-disulfide isomerase-like protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
alkyl hydroperoxide reductase
SCNpilot_BF_INOC_scaffold_65_228
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

271931..273118
DNA (1188bp) protein (396aa)
hypothetical protein id=7717898 bin=BACIGN_2 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:ESU28497.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium lim
thiol oxidoreductase
SCNpilot_BF_INOC_scaffold_65_229
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

273128..273553
DNA (426bp) protein (142aa)
hypothetical protein id=7717897 bin=BACIGN_2 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_65_230
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

273550..274776
DNA (1227bp) protein (409aa)
hypothetical protein id=7717896 bin=BACIGN_2 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_65_231
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

274828..275619
DNA (792bp) protein (264aa)
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family id=7717895 bin=BACIGN_2 species=Bacillus macauensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
TrmH family RNA methyltransferase; K03437 RNA methyltransferase, TrmH family Tax=GWF2_RIF_IGX_33_9_curated
tRNA/rRNA methyltransferase SpoU
SCNpilot_BF_INOC_scaffold_65_232
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

275616..276704
DNA (1089bp) protein (363aa)
serine--glyoxylate transaminase (EC:2.6.1.45)
serine--glyoxylate transaminase id=7717894 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
serine--glyoxylate transaminase Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
SCNpilot_BF_INOC_scaffold_65_233
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


276701..277945
DNA (1245bp) protein (415aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] id=7717893 bin=BACIGN_2 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
nucleoside-triphosphatase rdgB (EC:3.6.1.15)
dITP/XTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405};; Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Non-standard pur
SCNpilot_BF_INOC_scaffold_65_234
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

277945..279429
DNA (1485bp) protein (495aa)
dacB; D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] id=7717892 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
dacB; D-alanyl-D-alanine carboxypeptidase
Tax=BJP_IG2069_Ignavibacteriae_38_11
SCNpilot_BF_INOC_scaffold_65_235
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(279433..280335)
DNA (903bp) protein (301aa)
id=7717891 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=3392796 Tax=GWF2_RIF_IGX_33_9_curated
SCNpilot_BF_INOC_scaffold_65_236
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(280369..282621)
DNA (2253bp) protein (751aa)
hypothetical protein id=7717890 bin=BACIGN_2 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
TonB-dependent receptor plug Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_65_237
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

282755..283102
DNA (348bp) protein (116aa)
Ferredoxin id=7717889 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
4Fe-4S ferredoxin iron-sulfur binding domain protein
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=CG_Ignavi_02
SCNpilot_BF_INOC_scaffold_65_238
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

283149..284576
DNA (1428bp) protein (476aa)
hypothetical protein; K07047 id=7717888 bin=BACIGN_2 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_65_239
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

284578..285765
DNA (1188bp) protein (396aa)
hypothetical protein id=7717887 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD56277.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_BF_INOC_scaffold_65_240
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

285856..286326
DNA (471bp) protein (157aa)
Putative stress-responsive transcriptional regulator id=7717886 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Putative stress-responsive transcriptional regulator Tax=GWA2_Ignavibacteria_54_16_curated
stress-responsive transcriptional regulator
Displaying items 211-240 of 243 in total

View Taxonomy