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SCNpilot_BF_INOC_scaffold_39_70

Organism: SCNpilot_BF_INOC_Kapabacteria_60_234

near complete RP 52 / 55 MC: 3 BSCG 47 / 51 ASCG 13 / 38
Location: comp(73417..73857)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=7718256 bin=BACIGN_2 species=Gordonia effusa genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 147.0
  • Bit_score: 295
  • Evalue 2.10e-77
RNA polymerase sigma factor, sigma-70 family Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 138.0
  • Bit_score: 91
  • Evalue 8.60e-16
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 134.0
  • Bit_score: 81
  • Evalue 2.30e-13

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Taxonomy

RIFOXYC2_FULL_RIF_IGX_35_21_curated → RIF-IGX → Bacteria

Sequences

DNA sequence
Length: 441
ATGGCATACTGCATCGCCATCACCAACGACTATGAAGTCGCCCAGGATGCCTTCCACACGACGGTCCTGTCGGTATTCGAACACCGGCATGACTACCGCAACGGAAACCTGATGGGGTGGATCTTCACCATTGCAAGGAACACATGCCGCTCGATGGCGCGGCGTGACAGGAAGCGCGTACCGATGGACGTCGTACCGGAACCATCGATCGATGCATCGAATCAGATGGCCGGCGATGAGAAGCAGTTGATCCAGGAGTCGATCATGAAGCTTCCCGAAGAATTCAGACAGGTCATCCTGTTGAAGTACTTCGGTGACATGTCCGTGGAAGAGATCGCAGCTTCGGAAGAAATATCGACGGATCTCGTCAAGGTCCGCCTCTATCGCGCGCGCAAGCGCCTCGACGTTCTACTTCGTCCCCATTTCGAGCCACATACATGA
PROTEIN sequence
Length: 147
MAYCIAITNDYEVAQDAFHTTVLSVFEHRHDYRNGNLMGWIFTIARNTCRSMARRDRKRVPMDVVPEPSIDASNQMAGDEKQLIQESIMKLPEEFRQVILLKYFGDMSVEEIAASEEISTDLVKVRLYRARKRLDVLLRPHFEPHT*