ggKbase home page

SCNpilot_BF_INOC_scaffold_39_152

Organism: SCNpilot_BF_INOC_Kapabacteria_60_234

near complete RP 52 / 55 MC: 3 BSCG 47 / 51 ASCG 13 / 38
Location: comp(162958..163674)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=7718172 bin=BACIGN_2 species=Chlorobaculum tepidum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 476
  • Evalue 1.40e-131
tRNA pseudouridine synthase B Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 231.0
  • Bit_score: 201
  • Evalue 9.60e-49
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 227.0
  • Bit_score: 189
  • Evalue 9.90e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC2_FULL_RIF_IGX_35_21_curated → RIF-IGX → Bacteria

Sequences

DNA sequence
Length: 717
ATGCTTCAGCGCTCCACTCTCGATGCACTGTCCTCATGGCTGGAATCGGCCCGTTCGACGGGAGCGGTAGCGCTCGTCGACAAGGAAGAGGAGTGGACGTCCTTCGACTGCGTGGCCAAGTTGCGCGGGATGACGAAGGTGAAGAAGGTCGGTCACGCCGGTACGCTCGATCCACTTGCGACGGGTCTCCTCATTCTCTGCTTCGGTCGCGCGACCAAGGACATCGTTCTTTTCCAGGATGCCGACAAGGCATACGATGTGACGATCAAGCTCGGTGCCACGACGGCGACCGACGATCGCGGTGCTGCCGAGGTCGACGCGGCGTCCCTTCCTCTCGATGCGGATACTGTACGTACGGCACTGCAGGCCTTCGTGGGCGATATCGAACAGACACCTCCCGACTATGCTGCCGTGCGTCACGGCGGGCGACGTCAGTACGATCTGGCGCGTGAAGGACGGGAATTCGTTCCGAAGGTGCGGCAGGTGACGGTACACGGCATCGGCGATATCGTCGTGGAATGGCCCTACGTCCATGCTCACGTTCGCTGCTCGAAAGGAACCTACATCCGTTCCATCGCACGCGATCTTGGCACGGCACTTGGTTGCGGCGGATACGTATGGTCGTTGCGCCGGACCCATATCGGAGCCTTCGACGTACGGGAAGCACTGACGATCGGTGAAATTCAGGAAGCATTGCGGACGCTGACTACGGCATGA
PROTEIN sequence
Length: 239
MLQRSTLDALSSWLESARSTGAVALVDKEEEWTSFDCVAKLRGMTKVKKVGHAGTLDPLATGLLILCFGRATKDIVLFQDADKAYDVTIKLGATTATDDRGAAEVDAASLPLDADTVRTALQAFVGDIEQTPPDYAAVRHGGRRQYDLAREGREFVPKVRQVTVHGIGDIVVEWPYVHAHVRCSKGTYIRSIARDLGTALGCGGYVWSLRRTHIGAFDVREALTIGEIQEALRTLTTA*