ggKbase home page

SCNpilot_BF_INOC_scaffold_102_102

Organism: SCNpilot_BF_INOC_Flavobacterium_39_30

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 15 / 38 MC: 1
Location: comp(111172..112002)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcription regulator protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FV49_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 265.0
  • Bit_score: 440
  • Evalue 1.30e-120
AraC family transcriptional regulator {ECO:0000313|EMBL:KIA86531.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flav similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 264.0
  • Bit_score: 456
  • Evalue 3.30e-125
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 273.0
  • Bit_score: 426
  • Evalue 4.30e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. AED → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 831
ATGGAGCAAAACAATCAGGTCATTGAAAAATACTATACCAAAGATGTCGATACCGATAAGAGCAGTATTTACTGCCATCATGATTTGATGGGCGAATTGCTCATTCCAACGCACCGGCACGAAAAAGCACAGCTGTTGTATACGGAAGGCGGGATTGTATATGTGACCACCGAAACCAAAACCTATTTTCTTCCGGCACGCCATTTTATGTGGATTCCGAACAATATCAGGCACAGTATTCATCCCAGTTCGGAAAATGTAATGATGCGGAACCTGTATTTTCCGATAGATAAGAATGAACATTCCTTTTATAATAATGAAGGAATTTACCCGGTAAATGATTTGCTATTGCAAATGATGCTTTTTACAAACCGGTGGAATGGTAATCTGAAAAAAGGCAGCCGGAATTTTGTGATAGCAAAAGCCATTAAAGCGATCTTGCCGGAAATATGTGAAACCAATCTGCCGCTGGCATTACCTTCGGCAAAAGATAAAAGGCTGATTAAAATTGTATCCTATCTGGATGAAAATTTAGATGAAACCATCTTTTTTTCGGATCTGGCAGCAAAATTCGGATTCAGTGAGCGTTCCTTATACCGCCTGTTTCAAAAAGACCTCGGCATGTCGTTTATCCAGTTTTTTACAATCCGAAGAATGCTAAAAGCAATTGAGCTGCTTTTGGAAAAAAGATTACCGGTAAACGAAGTGGCGCAGGCGGTTGGTTACAACAGTATCCCGACTTTCAGCAATACTTTTTATAAACTGTTAGGGCAGCGTCCGTCCGATTATCTAAACGGTGTTGAAATTCTAAAAAAAAGCCAGCAAAGTTAA
PROTEIN sequence
Length: 277
MEQNNQVIEKYYTKDVDTDKSSIYCHHDLMGELLIPTHRHEKAQLLYTEGGIVYVTTETKTYFLPARHFMWIPNNIRHSIHPSSENVMMRNLYFPIDKNEHSFYNNEGIYPVNDLLLQMMLFTNRWNGNLKKGSRNFVIAKAIKAILPEICETNLPLALPSAKDKRLIKIVSYLDENLDETIFFSDLAAKFGFSERSLYRLFQKDLGMSFIQFFTIRRMLKAIELLLEKRLPVNEVAQAVGYNSIPTFSNTFYKLLGQRPSDYLNGVEILKKSQQS*