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SCNpilot_BF_INOC_scaffold_107_117

Organism: SCNpilot_BF_INOC_Flavobacterium_39_30

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 15 / 38 MC: 1
Location: 117211..118083

Top 3 Functional Annotations

Value Algorithm Source
O-antigen export system, permease protein n=1 Tax=Formosa sp. AK20 RepID=M7NAH7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 284.0
  • Bit_score: 328
  • Evalue 7.70e-87
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 289.0
  • Bit_score: 335
  • Evalue 8.90e-89
ABC-2 type transporter similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 294.0
  • Bit_score: 326
  • Evalue 1.10e-86

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Taxonomy

Polaribacter sp. Hel1_85 → Polaribacter → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGATAACTGAAAATACTGAGAAAGATAAATGGCTGTATGAGATTACTCCTAAAGCGAAATTACTATCGTTTGATTTTACCGGGATCTGGCAATATCGTGATTTGCTGATGATGTTTGTGAAAAGGGATGTGGTTACCTATTATAAGCAAACTATTTTAGGGCCGCTTTGGTTTTTAATCCAGCCTTTGGTTACTTCAATTATCCAGTTTATTGTCTTTTTTAAGATCGCAAAACTAGAATCGGACGGAATACCTTATTTTTTATTTGCCTTAGCAGGAAATACACTTTGGTTTTATTTTTCGGAATGTTTTAAAACCACTTCCGATACTTTTAAGACCAATCAGAATATTTTCGGGAAAGTATATTTTCCCAGAATAATCATGCCGCTTTCGACTACGATATCCAATTTGCTCAAATTCGGAATTCAGTTCCTGCTTTTTATTGCCGTTCTGGGCTATTATATTTTTAAAGGCTTTGCAATTGCTCCACAATGGACCATCCTGTTTACACCCTTGTTGTTAATTGTAATGGCACTGATGTCATTAGGACTGGGGATGATCATTTCGTCGCTTACCACGAAATACCGGGATCTTACTTTTGTGGTTTCCTTCGGTGTTTCGTTATATATGTATATCACACCGGTTATCTATCCCACTTCTCAGGTTATAAAAGAATTACCGGCAGGTTATGACTGGTTGGTATATGTTAATCCGCTCACGAGTATTTTTGAGTTTTTTAAATACTCTTTTCTGGGAAAAGGAACCTTTACTATTCTGGGATTGGCTTATTCCGCAGGAAGTACATTACTTCTTTTTCTAATCGGGTTAACCATATTCAACAGAACAGAAAAAAGCTTTATTGATACCATATAA
PROTEIN sequence
Length: 291
MITENTEKDKWLYEITPKAKLLSFDFTGIWQYRDLLMMFVKRDVVTYYKQTILGPLWFLIQPLVTSIIQFIVFFKIAKLESDGIPYFLFALAGNTLWFYFSECFKTTSDTFKTNQNIFGKVYFPRIIMPLSTTISNLLKFGIQFLLFIAVLGYYIFKGFAIAPQWTILFTPLLLIVMALMSLGLGMIISSLTTKYRDLTFVVSFGVSLYMYITPVIYPTSQVIKELPAGYDWLVYVNPLTSIFEFFKYSFLGKGTFTILGLAYSAGSTLLLFLIGLTIFNRTEKSFIDTI*