ggKbase home page

SCNpilot_BF_INOC_scaffold_123_136

Organism: SCNpilot_BF_INOC_Flavobacterium_39_30

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 15 / 38 MC: 1
Location: comp(163557..163847)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein {ECO:0000313|EMBL:KFF10891.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 96.0
  • Bit_score: 178
  • Evalue 3.50e-42
PAAR repeat-containing protein id=2667420 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 96.0
  • Bit_score: 174
  • Evalue 4.80e-41
PAAR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 94.0
  • Bit_score: 161
  • Evalue 1.50e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium soli → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 291
ATGAAACCAGCAGCACGAATTACAGATATGCATACCTGCCCGATGGTTACCGGAAATGTACCTCATGTAGGCGGACCTATATTGCCGGCCGGCGAACCGACAGTATTAATTGGCGGAATGCCCGCAGCAAGAGTAGGCGACAAAGCAATCTGTACCGGTCCACCCGATACGATAGCCGCCGGATCATCGACCGTTTTAATAGGCGGAAAACCGGCAGCAAGACAAGGCGATACCACAGCACATGGAGGTGTCATATCGGCTGGTCTGCCCACCGTGTTAATTGGTGGATAA
PROTEIN sequence
Length: 97
MKPAARITDMHTCPMVTGNVPHVGGPILPAGEPTVLIGGMPAARVGDKAICTGPPDTIAAGSSTVLIGGKPAARQGDTTAHGGVISAGLPTVLIGG*