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SCNpilot_BF_INOC_scaffold_157_13

Organism: SCNpilot_BF_INOC_Flavobacterium_39_30

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 15 / 38 MC: 1
Location: 12498..13244

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 247.0
  • Bit_score: 437
  • Evalue 1.10e-119
truA; tRNA-pseudouridine synthase I (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 245.0
  • Bit_score: 361
  • Evalue 1.50e-97
tRNA-pseudouridine synthase I n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQH3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 247.0
  • Bit_score: 436
  • Evalue 1.30e-119

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Taxonomy

Flavobacterium limnosediminis → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 747
TTGAGATATTTCATAGAATTTGCTTATAACGGAAAAAACTATCACGGCTGGCAATATCAGCCTCATGCTATATCGGTTCAGGAAACTTTAAATAAAGCTTTAACGGTTTTATTGCGCAGGCCTATCGACCTTGTTGGAGCCGGAAGAACCGATTCCGGAGTACACGCCAAACAAATGTATGCCCATTTTGATTATGAAGAAACCTTAAATTCCGATTACTGGGTACAAAAATTAAACTCTTTTTTACCAAAAGATATCGTGGTTTACCGTCTTATTCCGCTGCATGATGAGGCGCATGCCCGTTTTGATGCCACAAGCAGAACCTATGAATATCATATCCACACTTTCAAAGATGCCTTTGAAAATGAAGGAAGCTGGTATCATTTCCACGCGCTTGATGTCGCTGCGATGAATCAGGCATCCGAAATACTGTTTGAATACATCGATTTTGAATGTTTTTCAAAAGTACATACCGATGTTAGGACATTTAATTGCAAAATCACGGCAGCCCATTGGCAGCAAAACGAAACACGGTTAGTCTTTACAATTACCGCTGATCGTTTCTTAAGAAACATGGTCAGAGCTATTGTCGGGACATTAATAAAAATTGGATTAGGTAAAACTACATTGGATGATTTCAGAAAAATAATTGAAAGCAAAAACCGTAGTGAAGCAGGTTTTTCAGTACCGGCACACGGTTTGTACCTGACGAAAGTTATCTATCCGTATATCCAAGAGCGCCCATAA
PROTEIN sequence
Length: 249
LRYFIEFAYNGKNYHGWQYQPHAISVQETLNKALTVLLRRPIDLVGAGRTDSGVHAKQMYAHFDYEETLNSDYWVQKLNSFLPKDIVVYRLIPLHDEAHARFDATSRTYEYHIHTFKDAFENEGSWYHFHALDVAAMNQASEILFEYIDFECFSKVHTDVRTFNCKITAAHWQQNETRLVFTITADRFLRNMVRAIVGTLIKIGLGKTTLDDFRKIIESKNRSEAGFSVPAHGLYLTKVIYPYIQERP*