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SCNpilot_BF_INOC_scaffold_24_180

Organism: SCNpilot_BF_INOC_Flavobacterium_39_30

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 15 / 38 MC: 1
Location: 205798..206478

Top 3 Functional Annotations

Value Algorithm Source
Winged helix DNA-binding domain n=1 Tax=uncultured organism RepID=T1W7X9_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 225.0
  • Bit_score: 283
  • Evalue 2.20e-73
MarR family transcriptional regulator {ECO:0000313|EMBL:KFF26540.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chr similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 224.0
  • Bit_score: 292
  • Evalue 6.70e-76
nicR; HTH-type transcriptional repressor NicR similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 218.0
  • Bit_score: 282
  • Evalue 8.20e-74

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Taxonomy

Chryseobacterium vrystaatense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 681
ATGAACTATCAACTTATTAAGGACGTTATTCAACTTGTAGAGAAATTTGAAAGGGACAATAACAGTGATGGTTATCCAAAAGATATAAAAGGCTTTAAAAAATGGGTTTCTGATAATGAAAAGGAGACGAACTCTGATTTAAAAGAACCTGATTGGGAGGGTAAAATAGATGGCAGAAGTCCAGAGAGTGTAATCAGTACTTTATTGGTACACATGAATCGATATGCTAAAGCCTACTCTAAATCTGCTATTCACGGTTCTGAGTTTTCGACACAAGAAGATTTCGTTTACCTAATTAATTTAAAAGCTTTTGGTGCAATGACAAAGATGGAGCTTGTTAAAAAAAATATACAGGATAAACCAACAGGGATGCAAATCATTAACCGTTTGATCAAAAATGGCTGGGTAATACAGAGTGATTCAGAAACGGACAGAAGAAGTAAAGTAATTAAGATCACTTCCAGAGGTTTGGAATCATTAAGCGAACAAATGGGAAAAATACGCCTTGCAACTCAAATTGTTTCAGGTGATTTGTCTTATCCTGAAAAAATGCAGCTGATAAGGTTATTAAATAAACTGGATGATTTTCACCACCCGATTTTTTCCCAACATATAGACAGTCATGAGCTTTTGCAAAAAGTGAATGATCACTTTTTATTCACTAAAAAGACAAGTATATGA
PROTEIN sequence
Length: 227
MNYQLIKDVIQLVEKFERDNNSDGYPKDIKGFKKWVSDNEKETNSDLKEPDWEGKIDGRSPESVISTLLVHMNRYAKAYSKSAIHGSEFSTQEDFVYLINLKAFGAMTKMELVKKNIQDKPTGMQIINRLIKNGWVIQSDSETDRRSKVIKITSRGLESLSEQMGKIRLATQIVSGDLSYPEKMQLIRLLNKLDDFHHPIFSQHIDSHELLQKVNDHFLFTKKTSI*