ggKbase home page
Advanced Search
Search Help

SCNpilot_BF_INOC_scaffold_34_42

Organism: SCNpilot_BF_INOC_Flavobacterium_39_30

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 15 / 38 MC: 1
Location: comp(52486..57027)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
TonB-dependent receptor n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VIV9_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 999.99
  • Bit_score: 1178
  • Evalue 0.0
TonB-dependent receptor {ECO:0000313|EMBL:EPR70140.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella ps similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 999.99
  • Bit_score: 1178
  • Evalue 0.0
laminin G sub domain 2 similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 999.99
  • Bit_score: 1154
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Winogradskyella psychrotolerans → Winogradskyella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4542
ATGAAAGCAACAATGACCACATTAGTAAAACACTTACTGATTGTAGGACTTAGTTTTCTTCCCAATTTTTTATCGGGACAGACCACACAATTACAGCAGGAAAACTTTGAATCAGCAAGTACCTGGACAGCTTCTGGCGCTACCTTTACCACAACCAATGCCTACAACGGCACTTACAAAGCTGTCATCCCGGTTAATGGAAGTTCCATTACCTCGCCTGTTATTAACACGACAGGCTACAACAAAATCGATGTTCGCTTCTTTGTGAAAAGCAACAATGCAAACGCCGGTGACAAAATAACGCTGCAATACAGGGATAATTCCCTTGCCTCATGGTCGGACGTCAGAGTTGTCGAAAAAGGAACCCCAAGCGGAATCTCCTATAGAGATATCAATGACAACACCAATTACCATGCGCTTGTCGGAACTATTTTTTCAACCAGCTCCACATTTGCCGCCACCTCGCAATTCCGTTTTGTAACCACATCAGGATCTTCTTCCCGGCAGTTTTACATTGACTACATCACGGTTAGCGGTACAAAAGACAATACCATTGCTACCGGACCCGGCGGCATTACCAGCAATCTGGAAATGTGGCTGAGAGCCGACCTGGTAGACGGGGTCACTATCGGTACCGACGGTGCAAACGTGAACATCTGGACCGACAAAGGAAAAGGTCACGATGCCAAAGTTATTGACGCCACTAACGCTGCCCTGACCGTAAAACCTGTCTACCGAAATAACGCCTCCAAAAATATCAACTTCAATCCGGTGGTTGAGTTTGGCAACACGCCTTCCGCATCGGCATCCAATTATACCTATTTATCGAACAAAGCCGAATTACAGGGAACATCCGGTTTTTACAGTAACGATCTCTTTATTGTAGTCATTAACGACAACCCGGCTTCCCTTGTATCCACTTCATCCAGTGTCGATTTATTCTGTTCCCAGTCCCCGGCTTCGACCACTTATGCCAAAGATGGTACCGGAATTGGTTTCGGACAGTATTCTATCCGTCTTGACAATGAAGTAGTAAGCTACTGTATTGGTACCACGCCGGATCCCGTAGATCCCGATGTTAATACAAGAGGATATGGTCTGGCCCAGGTAAACGGAACCTTTTCCGGCGTTAACATCATCAACAGCCGGCACAACAGCACCAATACCAAACAGGAATTACACAGCAATGCCCTGAGCATATCCAATACAGAAGTAGGTACGCCTGCCTGGGTTGCAGTACAAAACAAAAGATTCTGGCTGGGCAGAAGCCAGCTTTTTGATGGTAGTTTCGGCGGCAGGATTGCAGAAGTAATCTCCTATTCTGCCCGAAAAAATGACGCTACAGAACGCAACCGAATTGAATCCTATTTAGCCATTAAATACGGTATCACTTTAGGCACTAACGGTACCAGTCAAAACTATGTGAACTCTGCCGGTACGACAATATGGAACATCGCACCAACAGGATTCAATTATGACATTGCCGGAATCGGAAGAGACGATGCCGCTCAATTAAATCAGAAACAATCCAAAAGTATAAACTCCGGAGCGGTCATCACAATGGGACTCGGAGATATCTTTACGACCAACGCTGCAAACACCAATACTTTTGGCGCCGACAGAAGATGCCTTGTATGGGGCAGTAACGGACTTGCGATGACCAACAGCGGTTCTCCGGTAACCGTAAGTTTCGGTCCTTCAACCGTTACCACCTCAACGGATGTTACCAATAAAAAATGGAAGGTTGTGGAAACCGGCGGTGATGTTGCTACCGTTAAGGTTTCGCTGGCTACAACAGATCTGGCCAGTTTACCGGCTCTATCCGGAAACGATGCCTATGTAATGATCGTTGCCAGCGATGCGGCATTTACAACCGGCGTAGAAACCGTTTTCCTGAACACAAACGGAGCCAATCAGGAATGTTTTTACGATTTTGACGGTACAAAATATATTGCGTTTGGTGTAGCCCACGAAGTAATTGCGTCCAGACACATTACTATTGACGGCGTTGATGATGCCGTAAAAGTAAGCAACGCAAACGACCTTACTGGAGCTTTCAGTATCATGGTATGGGCAAGACCTACAGGAGCGAACACTGCGCTTTCCGACAAAACAATTGTTTCCAAACACAACGGAACAACCGGATATCGTCTGGTAATACAAAACGACAATAAAATCAGAATGGAGTGGAACGGAAATTCTTTGGTTTCCAACACCACTTTACCGAATAACGAATGGCACAATATTGCCGCAATTTATAATTCCGGGACGCTGTCCTTATACATTGACGGTGTTTTAGACAAATCCGGAAGCATAACGGCACCAACGGCTACAACAAGCATCTTTACCATCGGTGCCGAATACAGAAGTAAAAGCAGTACCGTAAATGTGTTTAAAGGAGACATAGACGAACTGCGTTTCTGGAACAGAGCCATTACTTTAGCCGAGCTGCGCTTTATCATGAATCAGGAGATCAATAACTCCGGAGCCAATACGATTGGTAAAATTATGCCATCTACGGTTACCAAAAACGACATCAGCGCACTAACATGGGCGAGCCTGACCGCTTATTATTCGATGAATACCTACATTGGCACCCATATTAATGACGATTCTGTAAACAACAACAGAGGAAGTCTGGTTACTCCGGATAAAACCGGTGTCAATACCCAGACAGCACCAATGCCTTATGACAGTGCTGCCAATGGTCTTTGGTCGGATACCGCAACATGGACTAACGGAACCACCTTTGCCTTACCGTCGGCATTGTCGATAATAGACAACAGCACGACCATTGACTGGAACATTGTGAGAACCTCACACACCATTACTTCCAATGGTAACAAAACGCTGTTAGGGTTCTTTGTAAACGCCAATACCGTTAATGCTGCCAACGATTCCAAAATAGAGGTCAGTCACTTTTTAAGGCTAAACGGAAAAATTGACTTACAGGGCAAATCCCAATTGGTACAAACCTATAATTCTGATCTTGACCCTACCAGTTCCGGTTCTATTGAACGCGATCAGCAAGGACAGAAAAGCATTTACAACTACAACTACTGGTCGTCACCCGTTGGCGCGATCAACAGCACGACCAACAACAATAATTATACGGTAAATGGTGTTTTAAGAGACGGAACAAACACCGCAACACCAGTTGCCATAAACTGGGTAAACGGTATGGACGGTTCCACAGGAACGCCAATTAACCTGGCAAGACGCTGGATTTATAAATTCCAGAACCTTTCTGACCTTTATGCAAACTGGACACAAATATTCGAAACCGGAATATTGGCACCTTCAAACGGATTTACCATGAAAGGCAGCGGAACGGCTACTGCAACGCAAAACTATGTGTTTGTCGGAAAACCATACAACGGCAGAATAAACGGCACCGTTTCGCCCAACAATATTAATTTAAGCGGAAACCCTTATGCCTCAGCTTTAGATGCCCAACAGTTCATTACCGATAATGCTGCTGTTATTAACGGATCGATTTACTTCTGGGAACACTATCCTACGAACAACACCCATGTATTGCTTCAGTATCAGGGCGGTTATGCCACCCGGAACTTTTCTGGCGGAACACCGCCGGTAGCGCCGTTTGGCATCAGCGGATTAGGATCCAGCGCAAGGGTTCCGAACCGTTATATCCCGGTTGGGCAGGGCTTCTTTATACAGGCAAATGCTACCGGAGGAACTATTGTGTTCGACAACAACCAAAGAACCTTTGTTAAAGAAGATGCCCCAACATCGAACATCATGTTTAAAAACGCTTCCGGCGCCAATACCCAGATGTCGGCTTCAGATCATTTTAACGACAATACGAATGACAGTACTACCGCCGAAGACACATTTGCCAGAATACGTCTGGGCTTTACTTCCCACAATGGTAATCACAGACAGTTATTGCTTGCCTTTATGGAAGAACATGCAACAGATGGATGGGATTACGGTTACGACGGCATTGTTCTTGACGACGATTTAGTACAGGATATGTTATTCCTTCTGGACGATAAAAAATTAGTTATCCAGGGTGTCGGTTACTTCAATGCGAGCGCTATTTACCCGTTATTGGTCAGAACCGATGTTGCCGGTGAAGTAAAATTCATGATCGATGAACTGGAAAACTTTAACCCGAATCAGCCTATCTATATTTATGACAACGTTACAAATGGATACCATGATATCCGAAATGCTCCTTTTGCTCTTGAAATTCCGGCAGGAGAAAACACAAGCCGTTTTTCATTACGTTTTGAAAAACAAAAACTTGCCGTTACAGAATTTGACTGGAGCGCGGTTAAGATGACTTACCTTCAGGGGAACAACCAGATTAAGATCAATAACGAGCTTACAGATGGCACCCGTATCGAAAAAGTAATGCTTTACAATATAACAGGACAGCTGCTTGGCACGTGGAAAACAGACAACATGGACCAGCAGGAAATCCTGCTGCCGGTTCGCAATGTAAGCACCGGTACCTATATTATAAAAGCTGACACAAACAAAGGTTCGCTCAGCCAGAAAACAATCATCAGATAA
PROTEIN sequence
Length: 1514
MKATMTTLVKHLLIVGLSFLPNFLSGQTTQLQQENFESASTWTASGATFTTTNAYNGTYKAVIPVNGSSITSPVINTTGYNKIDVRFFVKSNNANAGDKITLQYRDNSLASWSDVRVVEKGTPSGISYRDINDNTNYHALVGTIFSTSSTFAATSQFRFVTTSGSSSRQFYIDYITVSGTKDNTIATGPGGITSNLEMWLRADLVDGVTIGTDGANVNIWTDKGKGHDAKVIDATNAALTVKPVYRNNASKNINFNPVVEFGNTPSASASNYTYLSNKAELQGTSGFYSNDLFIVVINDNPASLVSTSSSVDLFCSQSPASTTYAKDGTGIGFGQYSIRLDNEVVSYCIGTTPDPVDPDVNTRGYGLAQVNGTFSGVNIINSRHNSTNTKQELHSNALSISNTEVGTPAWVAVQNKRFWLGRSQLFDGSFGGRIAEVISYSARKNDATERNRIESYLAIKYGITLGTNGTSQNYVNSAGTTIWNIAPTGFNYDIAGIGRDDAAQLNQKQSKSINSGAVITMGLGDIFTTNAANTNTFGADRRCLVWGSNGLAMTNSGSPVTVSFGPSTVTTSTDVTNKKWKVVETGGDVATVKVSLATTDLASLPALSGNDAYVMIVASDAAFTTGVETVFLNTNGANQECFYDFDGTKYIAFGVAHEVIASRHITIDGVDDAVKVSNANDLTGAFSIMVWARPTGANTALSDKTIVSKHNGTTGYRLVIQNDNKIRMEWNGNSLVSNTTLPNNEWHNIAAIYNSGTLSLYIDGVLDKSGSITAPTATTSIFTIGAEYRSKSSTVNVFKGDIDELRFWNRAITLAELRFIMNQEINNSGANTIGKIMPSTVTKNDISALTWASLTAYYSMNTYIGTHINDDSVNNNRGSLVTPDKTGVNTQTAPMPYDSAANGLWSDTATWTNGTTFALPSALSIIDNSTTIDWNIVRTSHTITSNGNKTLLGFFVNANTVNAANDSKIEVSHFLRLNGKIDLQGKSQLVQTYNSDLDPTSSGSIERDQQGQKSIYNYNYWSSPVGAINSTTNNNNYTVNGVLRDGTNTATPVAINWVNGMDGSTGTPINLARRWIYKFQNLSDLYANWTQIFETGILAPSNGFTMKGSGTATATQNYVFVGKPYNGRINGTVSPNNINLSGNPYASALDAQQFITDNAAVINGSIYFWEHYPTNNTHVLLQYQGGYATRNFSGGTPPVAPFGISGLGSSARVPNRYIPVGQGFFIQANATGGTIVFDNNQRTFVKEDAPTSNIMFKNASGANTQMSASDHFNDNTNDSTTAEDTFARIRLGFTSHNGNHRQLLLAFMEEHATDGWDYGYDGIVLDDDLVQDMLFLLDDKKLVIQGVGYFNASAIYPLLVRTDVAGEVKFMIDELENFNPNQPIYIYDNVTNGYHDIRNAPFALEIPAGENTSRFSLRFEKQKLAVTEFDWSAVKMTYLQGNNQIKINNELTDGTRIEKVMLYNITGQLLGTWKTDNMDQQEILLPVRNVSTGTYIIKADTNKGSLSQKTIIR*