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SCNpilot_BF_INOC_scaffold_386_11

Organism: SCNpilot_BF_INOC_Flavobacterium_39_30

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 15 / 38 MC: 1
Location: 10838..11353

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S013_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 171.0
  • Bit_score: 315
  • Evalue 3.10e-83
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ESU19729.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavo similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 171.0
  • Bit_score: 315
  • Evalue 4.30e-83
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 168.0
  • Bit_score: 246
  • Evalue 6.40e-63

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Taxonomy

Flavobacterium cauense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGAACCAACAGGAGTTTATAAAATTGATTTCTCCTTTTAAAGACAAATTGTTTCGGATGGCGAAACGTTTGCTTGTGAGTACTGAAGAAGCCGAAGATGCTACTCAGGAAGTTTTGGTGAAATTATGGAAAAATAACAATGTACTGTCGAGCTATTCCAGTGTTGAAGCTTTTGCAATGACGATGACCAAAAACTACTGTCTTGACCAGTTAAAGTCAAAAAGGGCCTCAAATTTGCAAATCGTACATAGCAATTACTCGGACGGAACGGCAAATGTTCAAAAACAACTTGAAGATAAAGACAGCTGGGACTGGGTGGAAAAAATAATGGAAACATTACCCGAGCAGCAGCGGCTTATTCTTCAAATGAGAGAAGTAGAGGAATATGAATTCTCGGAAATCGCCAAAATCATGGATATGAATGAAACAGCAGTGCGGGTGGCATTATCGAGAGCAAGGAAAATAATAAGAGAACAATTGGTTAAAAAACACAATTATGGAATTCAATTCAATTAA
PROTEIN sequence
Length: 172
MNQQEFIKLISPFKDKLFRMAKRLLVSTEEAEDATQEVLVKLWKNNNVLSSYSSVEAFAMTMTKNYCLDQLKSKRASNLQIVHSNYSDGTANVQKQLEDKDSWDWVEKIMETLPEQQRLILQMREVEEYEFSEIAKIMDMNETAVRVALSRARKIIREQLVKKHNYGIQFN*