ggKbase home page

SCNpilot_BF_INOC_scaffold_33269_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_65_15

partial RP 1 / 55 BSCG 1 / 51 ASCG 2 / 38
Location: 2..1111

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilQ; K02666 type IV pilus assembly protein PilQ id=12493058 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 374.0
  • Bit_score: 601
  • Evalue 4.60e-169
type IV pilus assembly protein PilQ; K02666 type IV pilus assembly protein PilQ Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 371.0
  • Bit_score: 527
  • Evalue 2.00e-146
type IV pilus assembly protein PilQ similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 393.0
  • Bit_score: 491
  • Evalue 2.50e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATCTGGATCGCCCCCAAAGACGAGTTGATGACCAAGGAAAAACTGGAATTCGAAGCCAAGAATGCGGTGGCCGACCTGGAGCCGTTGACGACCGAGTATATCCAGCTCAACTATATGCGGGCGGATGAGGCGCGATCAATGTTGTACGGGGCGACGGGTTCGTCCAACTCGGTGAGAGGCGAAGCGGTGAACTGTTCCGCGCAGGCACAAGGCCTGCAAGGTGTGGCAGCGCAGGCCGCCGCTCAGCAGAGCCAGGGGAATGATGCCGAGAAGGTTCTCACCAAGCGGGGCCGTGCGACCTTTGAACTGAAAACCAACACACTCATCATCACCGATACTGCACGCAAAATTCAGGAAATTCGTGCGTTGCTTGCGCGCCTGGATGTGCCGGCACGCCAGGTTATGATCGAGGCACGGGTCGTGGTGGCGGACAGTGGCTGGAACCGTGATCTGGGTGCCCGGCTGAATTTCTCGGCTGCGAATGCCAGTGGTACCCGTTCATTCAGCGGCGCGGGACAAGCCCTGCCAAATGTGGCGCCTAATTTGCTTATGAGCCTCCTGGATCCCGCTAACGGAAACCTGCTGGGGCTGGAACTGCGTGCCCTTGAAATGGATAACCGCGGCAAGGTGATTTCCAATCCGCGTGTGCTGACCACTAACCAGAAGCCAGCGGTGATTCTCAATGGATCACAGATTCCCTTCGTTACGCCTGGGACGGTCAATTCACCAGCCACCGTGACCTTCAAGGACGTCTTTCTCTGTCTGTTGGTCGATCCACAAATTTTGAATAATGATTCGCTGATCATGACTGTTGAAGTGCAGAAAGACGCGCAAGATCCAGGGGGTAGTGTTACGACCGGTGGTTTCACCGTCCCGGCCATTGCGACTAAACGCATTAAAACTCAGGTGAGGGTGAATAATGGCGAAACTCTGGTATTGGGTGGCATTTTTGACGGTGACGAGAACTCGTCCGTGAACAAAGTTCCCCTGCTGGGCGATATTCCAGTATTCGGCAACCTGTTCAAGACGACCCACAAGGAAAACAAGAAAACCGAGTTGATCATTTTCCTCACGCCGCGCATTCTCGACGATCGCCTGTCGCTCCGCTGA
PROTEIN sequence
Length: 370
IWIAPKDELMTKEKLEFEAKNAVADLEPLTTEYIQLNYMRADEARSMLYGATGSSNSVRGEAVNCSAQAQGLQGVAAQAAAQQSQGNDAEKVLTKRGRATFELKTNTLIITDTARKIQEIRALLARLDVPARQVMIEARVVVADSGWNRDLGARLNFSAANASGTRSFSGAGQALPNVAPNLLMSLLDPANGNLLGLELRALEMDNRGKVISNPRVLTTNQKPAVILNGSQIPFVTPGTVNSPATVTFKDVFLCLLVDPQILNNDSLIMTVEVQKDAQDPGGSVTTGGFTVPAIATKRIKTQVRVNNGETLVLGGIFDGDENSSVNKVPLLGDIPVFGNLFKTTHKENKKTELIIFLTPRILDDRLSLR*