ggKbase home page

SCNpilot_BF_INOC_scaffold_38740_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_65_15

partial RP 1 / 55 BSCG 1 / 51 ASCG 2 / 38
Location: comp(2..262)

Top 3 Functional Annotations

Value Algorithm Source
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12493479 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 85.0
  • Bit_score: 180
  • Evalue 1.00e-42
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 85.0
  • Bit_score: 171
  • Evalue 3.90e-40
sigma-24 (FecI) similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 87.0
  • Bit_score: 149
  • Evalue 5.40e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGATCATGCTCAGCCGTCTTCTTTTTGGCCCGTCTCGCCCCGGTATCGAAGCCTTGCGCCCGCTGCTCTACCGGATCGCCTTTGCCTGGTGCCATGATGCCGCGCTGGCGGACGATCTGGTGCAGGAAGCGCTCTCCAAGGGGTGGAAGCGGCGCGCCCAACTGCGCGACGAGGCCGCGCTGAAGGCATGGATGGTATCGATCATGAACCACTGCTGGCTCGATCACTTGCGCAGCCGGCGCGACTTCGACGACATCGAG
PROTEIN sequence
Length: 87
MIMLSRLLFGPSRPGIEALRPLLYRIAFAWCHDAALADDLVQEALSKGWKRRAQLRDEAALKAWMVSIMNHCWLDHLRSRRDFDDIE