ggKbase home page

SCNpilot_BF_INOC_scaffold_51410_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_65_15

partial RP 1 / 55 BSCG 1 / 51 ASCG 2 / 38
Location: 1..306

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] id=12493945 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 102.0
  • Bit_score: 203
  • Evalue 1.30e-49
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_cura similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 101.0
  • Bit_score: 195
  • Evalue 5.00e-47
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 101.0
  • Bit_score: 172
  • Evalue 7.00e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
TTTGCCGACATCTTCTACAACAACTGCTTCAAGAACGGCATCCTGCCCATCGTGCTCGACGCGGCCGTGGTGGATCGCCTGTTTCGCGAGTGCGGCGCCAACGAGGGTTATGCCCTGACCGTCGATCTGGACAAACAGACGGTGACGACGCCCACGGGCGAAGCCATCCCCTTCGATGTGGACGCGGGGCGCAAACACCGCCTGCTCAACGGTCTGGACGACATCGGGCTGACCTTGCTGCAGGCCGACAGGATCAAGGCCTACGAAGAACGGCGCAAGGTCGAAGCGCCGTGGTTGTTTGCATGA
PROTEIN sequence
Length: 102
FADIFYNNCFKNGILPIVLDAAVVDRLFRECGANEGYALTVDLDKQTVTTPTGEAIPFDVDAGRKHRLLNGLDDIGLTLLQADRIKAYEERRKVEAPWLFA*