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SCNpilot_BF_INOC_scaffold_4863

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4863_1
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..967
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D0235
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AAZ59434.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
SCNpilot_BF_INOC_scaffold_4863_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1162..1389)
DNA (228bp) protein (76aa)
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] id=12495205 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_4863_3
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(1441..2100)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000366B648
Uncharacterized protein {ECO:0000313|EMBL:KER09076.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
NADP oxidoreductase coenzyme F420-dependent
SCNpilot_BF_INOC_scaffold_4863_4
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2097..2462)
DNA (366bp) protein (122aa)
Globin n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FVI8_SHESH
globin
Globin {ECO:0000313|EMBL:ABV36861.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sediminis (strain HAW-EB3).
SCNpilot_BF_INOC_scaffold_4863_5
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(2483..3118)
DNA (636bp) protein (212aa)
branched-chain amino-acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=Caldatribacterium californiense
Branched-chain amino acid aminotransferase (EC:2.6.1.42)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037DC8C5
SCNpilot_BF_INOC_scaffold_4863_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3375..3545
DNA (171bp) protein (57aa)
TetR family transcriptional regulator Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_4863_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3686..3979)
DNA (294bp) protein (98aa)
Transposase mutator type n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ASE7_DELSC
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:AEF90115.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-
SCNpilot_BF_INOC_scaffold_4863_8
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3943..4350)
DNA (408bp) protein (136aa)
Transposase mutator type n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YRM3_BURA4
transposase
Transposase {ECO:0000313|EMBL:AKC71360.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
SCNpilot_BF_INOC_scaffold_4863_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4363..5682)
DNA (1320bp) protein (440aa)
Fis family transcriptional regulator id=12494350 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Fis family transcriptional regulator Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Fis family transcriptional regulator
SCNpilot_BF_INOC_scaffold_4863_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5830..7098
DNA (1269bp) protein (423aa)
sulfide-quinone reductase (EC:1.-.-.-); K00540 [EC:1.-.-.-] id=12494351 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfide-quinone reductase (EC:1.-.-.-); K00540 [EC:1.-.-.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sulfide-quinone reductase (EC:1.-.-.-)
SCNpilot_BF_INOC_scaffold_4863_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7211..7780
DNA (570bp) protein (190aa)
anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] id=12494352 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
anthranilate synthase component II (EC:4.1.3.27)
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:AAZ98177.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacill
SCNpilot_BF_INOC_scaffold_4863_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7777..8808
DNA (1032bp) protein (344aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] id=12494353 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenop
SCNpilot_BF_INOC_scaffold_4863_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9573..10595)
DNA (1023bp) protein (341aa)
hypothetical protein; K06915 id=12494355 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K06915 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
Displaying 13 items

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