ggKbase home page

SCNpilot_BF_INOC_scaffold_12200_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(1..441)

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC id=12494606 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 147.0
  • Bit_score: 289
  • Evalue 2.60e-75
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 147.0
  • Bit_score: 280
  • Evalue 1.30e-72
type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 147.0
  • Bit_score: 276
  • Evalue 3.80e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGCCTTTCTTCGACTACCGCGCCATCGACCAGACCGGCCGCACCGTCCGCGGCACGCTGTCGGCCGTCAACGACGTCGATCTCGAACTGCGGCTGAAGCGCATGGGGCTCGACCTCGTCACCCTGGTCGAGTTGTCGCGTCAGTACGCCCCCAGCGGCCGCGAGCGGGTGACGCGGCGCGATCTGGTGACCTTCTGCATCCACATGCGCTACATCACCCGCGCCGGGATTCCGCTGCTCGAAGGACTGCGCGATCTGCGCGACACCATGGAGAAACGTGGATTCCGCGATGTGCTGACCGCGCTGCTGGAAGACCTGGAAGGCGGCAAGGTGCTGTCGCAAGCGCTGGCGGCGCACCCGGCGGTATTCGGCGCCGTGTTCGTGCACAGCGTCAAGGCGGGCGAGCAGACCGGCCTGCTGGACACGGTATTCGAACGGCTG
PROTEIN sequence
Length: 147
MPFFDYRAIDQTGRTVRGTLSAVNDVDLELRLKRMGLDLVTLVELSRQYAPSGRERVTRRDLVTFCIHMRYITRAGIPLLEGLRDLRDTMEKRGFRDVLTALLEDLEGGKVLSQALAAHPAVFGAVFVHSVKAGEQTGLLDTVFERL