ggKbase home page

SCNpilot_BF_INOC_scaffold_12430_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(458..1543)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 369.0
  • Bit_score: 226
  • Evalue 1.10e-56
Uncharacterized protein {ECO:0000313|EMBL:AKA27538.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chloro similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 369.0
  • Bit_score: 226
  • Evalue 5.50e-56
Uncharacterized protein id=24578647 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 376.0
  • Bit_score: 147
  • Evalue 2.30e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas chlororaphis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGGTGCAAGGCCGCCAGCGTATCGGCCGTTTCACCCGACTGCGAAATGGTGACGATCAGCGCGTCGGGGTTCGGCACGCTGGTACGATAGCGGTATTCGCTGGCGATTTCCGCATAGGCCGGGATGCCGGCGATTTCCTCCAGCCAGTAAGTGGCCACTTTCGCGGCATGATAGCTGGTGCCGCAGGCGAGGAAAATCACCGCATTCACCTGGCCCAGCACCTCGGCGGCGTCGAAACCGAACCATTCGGGCTGGACGCGATCCTGCGCCACCGCGGTCAGCAGGGTGTCGGTCAGCGCACGCGGCTGCTCGTGGATTTCCTTCTGCATGAAGTGGCGGTAGCTGCCGAGTTCGGCCATGTCGGCCGACAGTTCGGACACATGCACGCTGCGGTCGGCCTTGTTCCCCGCCGCATCGACCACCGTCACCGCCAGCAGGCCGATGTCGGCGACGTCGCCTTCTTCCAGGTACATCACGCGCTGGGTCACCGGCAGCAGCGCCGAGACGTCGGAGGCAATGAAGTTCTCCTCGATGCCGAGGCCGATCAGCAGCGGGCTGCCCTTGCGCGCGCATACCAGATGATTGGGCGCATCCTCGCTCACCACGCCGATGGCATAGGCGCCTTCGAGCTCGACCACCGCGGCCCGGGTCGCCGCCAGCAGATCCTTCGACTGGCGGAAGTAATGCTCGATCAGATGCGCGATGACCTCGGTATCGGTTTCCGACGTGAAGGCGAAGCCTTCCGCCTTCAGACGCGCTCGCAAGGCTTCGTGGTTTTCGATGATGCCGTTGTGCACCACCGCGAGACGGCCGCTGACGTGCGGATGCGCATTGGCTTCCGATGGCGCGCCGTGCGTCGCCCAGCGGGTATGCGCAATACCCAGGTTGCCGTGTATCTGCCGGGCGGCGCACGCTTCGGCCAGGCCGGCGACGCGGCCGACGCTGCGCACCCGCCGCAGGCCGCCGTTGATAGTGACGAGGCCGGCGGAATCGTAACCGCGGTATTCCAGCCGCCGCAGGCCCTCGAGCAGAATGGGGACAACGTTACGCTGCGCTACCGCGCCGACTATGCCGCACATACCTAA
PROTEIN sequence
Length: 362
MVQGRQRIGRFTRLRNGDDQRVGVRHAGTIAVFAGDFRIGRDAGDFLQPVSGHFRGMIAGAAGEENHRIHLAQHLGGVETEPFGLDAILRHRGQQGVGQRTRLLVDFLLHEVAVAAEFGHVGRQFGHMHAAVGLVPRRIDHRHRQQADVGDVAFFQVHHALGHRQQRRDVGGNEVLLDAEADQQRAALARAYQMIGRILAHHADGIGAFELDHRGPGRRQQILRLAEVMLDQMRDDLGIGFRREGEAFRLQTRSQGFVVFDDAVVHHRETAADVRMRIGFRWRAVRRPAGMRNTQVAVYLPGGARFGQAGDAADAAHPPQAAVDSDEAGGIVTAVFQPPQALEQNGDNVTLRYRADYAAHT*