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SCNpilot_BF_INOC_scaffold_1383_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 851..2020

Top 3 Functional Annotations

Value Algorithm Source
RNAse E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] id=12493113 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 322.0
  • Bit_score: 630
  • Evalue 1.30e-177
RNAse E (EC:3.1.4.-) similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 322.0
  • Bit_score: 609
  • Evalue 8.60e-172
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=292415 species="Bacteria; Proteobacteria; Bet similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 322.0
  • Bit_score: 609
  • Evalue 4.30e-171

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAAGCGCATGCTTTTCAACGCAACCCAGGCGGAGGAACTCCGGGTTGCCATCGTCGACGGGCAGAAGCTCGTCGACCTTGACATCGAGTCCGCCAGCAAGGAACAACGCAAGGGCAATATCTACAAGGGTGTCGTCACCCGCGTCGAGCCCAGCCTCGAAGCCGCATTCATCGATTACGGCTGCGAGCGCCACGGCTTTTTGCCATTCAAGGAAATCGCCCGTTCCTGCCTGCCCGGCAACGGCAAGGTTCCGGAAAACCTGAAGGAAGGCCAGGAACTCCTGGTTCAGGTGGAAAAGGACGAGCGCGGCAACAAGGGCGCAGCGCTGACCACCTACGTCTCGCTGGCCGGCCGCTACATCGTGCTGATGCCGACCAACCCGCGCGGCGGCGGCGTGTCGCGCCGCATCGAGGGCGAGGAGCGCAACGAGCTGCGCGACACCCTGGCGCAGCTCGAGATCCCGGAAGGCATGAGCCTGATCGCCCGCACCGCCGGCATCGGCCGCAGCGCCGAGGAGTTCCAGTGGGATCTCAACTATCTCTTGAGCCTGTGGAAGGCCATCGACGGCGCCTCCACCTCGCAGCCCGGCGCCTTCCTGATCTATCAGGAAGGCAGCCTGGTGATCCGCGCCATCCGCGACTATTTCTCGGCCGACATCGGCGAAATCCTGATCGACACCGACGACATCTTCGAACAGGCGCAGCAGTTCATGGCGCATGTGATGCCGGACAACGTCAGCAAGGTCAAACTCTACCGCGACGACGTGCCGCTGTTCTCGCGCTTCCAGATCGAGCACCAGATCGAATCGGCGTTCTCGCGCCAGGTCAACCTGCCATCCGGCGGCGCCATCGTGATCGACCACACCGAAGCGCTGGTGTCGGTCGACGTCAACTCGGCGCGCGCCACCAAGGGCAGCGACGTCGAGCAGACCGCCTACAACACCAACCTCGAAGCGGCCGACCGACATGGAAAACCCCAAGCATCAGCGCGAAGTCGAGAACCGCCTGCGCGATGCGCTGCATCACGACCGCGCCCGCGTGCAGACCGGCAAGATTTCGCGTTTCGGTCTGCTGGAAATGTCGCGCCAGCGGCTGCAGCCCTCGCTCGGCGAAACCAGCTACACGTCATGCCCGCGCTGCCACGGCACCGGCCATATCCGTGGCACTGA
PROTEIN sequence
Length: 390
MKRMLFNATQAEELRVAIVDGQKLVDLDIESASKEQRKGNIYKGVVTRVEPSLEAAFIDYGCERHGFLPFKEIARSCLPGNGKVPENLKEGQELLVQVEKDERGNKGAALTTYVSLAGRYIVLMPTNPRGGGVSRRIEGEERNELRDTLAQLEIPEGMSLIARTAGIGRSAEEFQWDLNYLLSLWKAIDGASTSQPGAFLIYQEGSLVIRAIRDYFSADIGEILIDTDDIFEQAQQFMAHVMPDNVSKVKLYRDDVPLFSRFQIEHQIESAFSRQVNLPSGGAIVIDHTEALVSVDVNSARATKGSDVEQTAYNTNLEAADRHGKPQASARSREPPARCAASRPRPRADRQDFAFRSAGNVAPAAAALARRNQLHVMPALPRHRPYPWH*