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SCNpilot_BF_INOC_scaffold_1383_6

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(4542..5258)

Top 3 Functional Annotations

Value Algorithm Source
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12493116 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 464
  • Evalue 7.40e-128
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 235.0
  • Bit_score: 288
  • Evalue 7.80e-75
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 231.0
  • Bit_score: 262
  • Evalue 1.20e-67

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Taxonomy

R_Gammaproteobacteria_61_13 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCAACACGCCATGCCACAGATACCAATCGGGGAATTGACGGACACCGGACTGGCGGAGCGCATTGCCTCGGGAGACGTGGTGGCGTTGCAGTACTTGATGCGACGGCACAACCAGACGCTCTACCGCACCGCACGCAGCATCCTGAAAGACGATGCCGAGGCCGAGGATGCCGTGCAGGAGGCCTATGTGCTGGCCTATCGCGCAATGGATCAGTTTCGCGGCGATGCGAAACTGTCGACCTGGCTGATCCGTATTGCGGTCAATGTGTCGATCCGGCGAGCACGAAAACTCAACCGCAGCGCCGAGGTGATCGACCTGGTGGGCGATCCGGATGCGCTGCGGGGGACGGATGAGGATTTGCTGGAGGCCGGGATGGATGAACATGCGCCCGAACAGCCTGAACATGTCGCCTTGCGCGCGGAAACCCGACGGCTGATCGAAGACAAGATCAACCGGCTGCCGGATATCTTCCGCACGGTATTCGTCATGCGTGCCGTCGAGGAGATGTCGGTGGCCGAGACGGCCATTTGCCTGGATATTCCGGAGGCCACGGTACGTACGCGCTATTTCCGGGCGAAAAGCCTGCTGCGTGAAGCCCTGGCGCGCGAGATCGACTTCTGCCTGGGCGAGACATTCTCGTTTGCCGGAGAGCGTTGCGACCGCATCGTCGCCGGCGTGTTACGCCGGCTCGACACGCCACCCGGCACATTCTGA
PROTEIN sequence
Length: 239
MQHAMPQIPIGELTDTGLAERIASGDVVALQYLMRRHNQTLYRTARSILKDDAEAEDAVQEAYVLAYRAMDQFRGDAKLSTWLIRIAVNVSIRRARKLNRSAEVIDLVGDPDALRGTDEDLLEAGMDEHAPEQPEHVALRAETRRLIEDKINRLPDIFRTVFVMRAVEEMSVAETAICLDIPEATVRTRYFRAKSLLREALAREIDFCLGETFSFAGERCDRIVAGVLRRLDTPPGTF*