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SCNpilot_BF_INOC_scaffold_1701_4

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 2560..4065

Top 3 Functional Annotations

Value Algorithm Source
putative RND efflux system outer membrane lipoprotein NodT id=12493134 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 502.0
  • Bit_score: 958
  • Evalue 3.40e-276
Putative RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:CBH98940.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage met similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 481.0
  • Bit_score: 722
  • Evalue 3.40e-205
putative RND efflux system outer membrane lipoprotein NodT similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 486.0
  • Bit_score: 682
  • Evalue 7.90e-194

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1506
ATGCGGTATTTCAGCTTGCCCCTACACAGATATGCCCCGGGTCTGCTCGGCATCATGGTGCTGGCGGGCTGCACGACGGTCGGTCCCGATTTCAAGACGCCGGACGCGCCCGCGGTCGAGCGCTACCTGCAGGGCGAGCGGCCCGCCCGCACGGCCTCGGCCGATGTCGGACAGGGGCGCGCACAAAGCCTGGAAGCCGGCCAGGCCGTCGCGTCCGAGTGGTGGACGGCATTCGGCTCGCCCCGGCTCGACGCGTTGGTGAAGCGGGCATTGCACGAGAGCTTCACGCTGGCCGCGGCAGAAGCCACGCTGCGCCAGGCGCAGCAACTCCATGCGGCTCAGGCGGGCTCGACCCTGTATCCGACCGTTAACGCCAGGCTGGGTGCCAGCCGCAACCAGGTCAATGCGGCCGGCCGTGGCGAACACGGAAATCAGCAGACGCTGTACAACCTGTACAACGCCGGGGTCGTCGTCAACTACAATTTGGACCTCTTCGGGGGCAACCGCCGCGCCCTCGAAGCACTGGCCGCGCAGGCCGATTATCAGGCCTACCAGCTGGCCGGCGCGCGCCTGGCCCTTGCCGGCAATGTCGTGACCACCGCGTTCGGGCAAGCCCAGCTGGGTGAGCAGATCGCGGCCACTGAAGCCATTCTGAAGGCCCAGCAAGACCAGCTCGACATTGCGCGCAAGCGCTTTGAACTGGGGGCCACCGCCCGGGCGGACGTGCTGGCCCTGCAAACCCAGGCGGAGCAGACGCGTGCCAGCCTGCCTCCCCTGCGCAACAAGCTGGAACAGGCCGATCATCTGCTGGCGGTGCTGACCGCGCAGGCGCCCGGCGAGGCCGATATCCCGCGCTTCACGCTGGCCGATTTCACCCTGCCTGAACATCTCCCCCTGGTGGTGCCGTCCGATCTGGTGCGCCAGCGACCCGACATCCAGGCGTCCACCGCCTTGCTGCATGCGGCCACGGCACAGTACGGCGTGGCCATTGCCAGTCTCTATCCGCAGATCGACCTGAGCGCCAGTCTGGGCACCCAGGCCCTGACCACCGGTGCGCTGTTCGGACCCGGATCGGTGATCTGGGCCCTGGCCGGGCAACTCGCCCAGCCGCTGTTCAACGCCGGTCTGAAAGCCGGGGCGAATGCGGCCGAAGCCAGCCTGCAGGCGGCTGGCGCCAATTACCGGCAGACCGTGCTGGAAGCGCTGCGCAGCGTGGCCGATGCGCTGCGTCAACTGGACAACGATGCCCAGGCCCTGCAGGCCCAGGCCACCGCGGAGGCCTCGGCGCGGGCATCGCTCGAACTGGTGCAGCAGCAGCACCAGCTGGGCGCGGCGAGCTACCTGCAGCTGCTCACGGCCCAGCAGCAGGCGCAACAAACCCGTATCGACCTGGTTGCGACCCGCGCCGCCCGCCTGGCCGACAGTGCGGCGCTGTACCAGGCCATGGGCGGCGGCGTACTGGATGCGCCCGCTACGCCGGCCGCGGCGCCGGCCGCGATCCGGTGA
PROTEIN sequence
Length: 502
MRYFSLPLHRYAPGLLGIMVLAGCTTVGPDFKTPDAPAVERYLQGERPARTASADVGQGRAQSLEAGQAVASEWWTAFGSPRLDALVKRALHESFTLAAAEATLRQAQQLHAAQAGSTLYPTVNARLGASRNQVNAAGRGEHGNQQTLYNLYNAGVVVNYNLDLFGGNRRALEALAAQADYQAYQLAGARLALAGNVVTTAFGQAQLGEQIAATEAILKAQQDQLDIARKRFELGATARADVLALQTQAEQTRASLPPLRNKLEQADHLLAVLTAQAPGEADIPRFTLADFTLPEHLPLVVPSDLVRQRPDIQASTALLHAATAQYGVAIASLYPQIDLSASLGTQALTTGALFGPGSVIWALAGQLAQPLFNAGLKAGANAAEASLQAAGANYRQTVLEALRSVADALRQLDNDAQALQAQATAEASARASLELVQQQHQLGAASYLQLLTAQQQAQQTRIDLVATRAARLADSAALYQAMGGGVLDAPATPAAAPAAIR*