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SCNpilot_BF_INOC_scaffold_18932_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(138..1415)

Top 3 Functional Annotations

Value Algorithm Source
putative RNA polymerase id=12495522 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 426.0
  • Bit_score: 816
  • Evalue 1.40e-233
ECF subfamily RNA polymerase sigma-24 subunit Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 423.0
  • Bit_score: 723
  • Evalue 1.30e-205
putative RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 417.0
  • Bit_score: 576
  • Evalue 6.70e-162

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
GTGACGGCGCAGGCAGCGGTTGCCGACACTCTGGCTGCGGTCTGGCGTATCGAGTCGGCCAGGGTCATCGCCGCCGTCGCGCGGCTCACGCGCGATCTCGGGCTGGCCCAGGAATGCGCGCAGGATGCGCTGGTCGCGGCACTGGAGCACTGGCCGGTCGAAGGCGTGCCGGACAACCCGGCTGCCTGGCTGATGACGGCGGCGAAGCGGCGTGCGTTCGACGCGCTGCGGCACCGCACGCAGGCCGTGCCCAAGCACGCCGAACTGGCAGCCGAACTCGACACGCAGCACGCCATTCGTGCAGCCGATTTCGCCGAAGCGGTCGATGCCGCGCTCGACGACGACATCGGCGACGACCTGCTTGCGCTCGTCTTCACCGCCTGTCATCCGCTGCTCTCGCCCGAGGCGCGCTCAGCGCTGACGCTGAGGGTCGTCGGCGGTCTGTCGGTGGAGGAAATTGCGCGCGCCTATCTCAAGCCGCCCGCCACGATCGCGCAACGCATCGTGCGCGCCAGGCGTACCCTCACCGAAGCGCGTGTCCCGTTCGAGACGCCGCGCGGCGCAGCATTGCACGCGCGCCTGCCTTCGGTGCTGGAAGTGCTTTATCTGATCTTCAACGAAGGCTACGCCGCCACCGTGGGTGACGACTGGATGCGCCCCGCGCTGTGCGCGGAAGCGCAACGCCTGGGCCGCGTGCTCGCCAGTCGTCTGCCGGAGGAAGCCGAAGTGCACGGTTTGCTTGCGCTGATGGAAATCCAGGCGTCGCGGCTGGCGGCGCGCGTCGATGCGAGCGGCGCACCCATCCTGCTCATGGAACAAGACCGCGGCCGCTGGGATCGCCTGCTGATCCGGCGCGGACTGGCGGCGCTGGAACACGCCAGGGCTTTGCCGGGTCCGCTCGGCGCCTATACCCTGCAGGCCGCCATCGCCGCCTGCCATGCGCGCGCCGCTGTCGCGGCCGACACCGATTGGGCCCGCATTGCCGCGCTGTACGACGCGCTGGCGCAGCTCGTCCCCTCGCCCGTGGTGGCGCTCAACCGCGCGGTCGCCGTCGGCATGGCCTTCGGGCCCGCGGCCGGGCTGGAACTGGTCGAGTCGCTTGCCGCCGGGCCCACGCTCAAAGGCTACCATCTGCTGCCGGCGGTACGTGGCGAGTTGCTGGCGAAACTGGATAGAATCGATGAAGCGCGCGCCGAATTCGCGCGCGCCGCCGAACTGGCGCAGAATGCGCGGGAACGGGCGTTGTTGCTGGCGCGAGCGGCTGGCGGGGAAATCTGA
PROTEIN sequence
Length: 426
VTAQAAVADTLAAVWRIESARVIAAVARLTRDLGLAQECAQDALVAALEHWPVEGVPDNPAAWLMTAAKRRAFDALRHRTQAVPKHAELAAELDTQHAIRAADFAEAVDAALDDDIGDDLLALVFTACHPLLSPEARSALTLRVVGGLSVEEIARAYLKPPATIAQRIVRARRTLTEARVPFETPRGAALHARLPSVLEVLYLIFNEGYAATVGDDWMRPALCAEAQRLGRVLASRLPEEAEVHGLLALMEIQASRLAARVDASGAPILLMEQDRGRWDRLLIRRGLAALEHARALPGPLGAYTLQAAIAACHARAAVAADTDWARIAALYDALAQLVPSPVVALNRAVAVGMAFGPAAGLELVESLAAGPTLKGYHLLPAVRGELLAKLDRIDEARAEFARAAELAQNARERALLLARAAGGEI*