ggKbase home page

SCNpilot_BF_INOC_scaffold_2642_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 3..350

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM id=12493277 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 116.0
  • Bit_score: 232
  • Evalue 3.00e-58
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 115.0
  • Bit_score: 212
  • Evalue 4.50e-52
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 115.0
  • Bit_score: 204
  • Evalue 1.90e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
GTCGAAGCCGTCCAGGACCATGGCAAAGCCCTGGTCGCCAAACTGGCCGGCATCGACGACCGCGACACGGCGTATGCCCTGCGCGGACAGGAAATCTCGGTGGCGAAGAGCGCATTACCGCCGCCGGGGGAAAACGAATTTTACTGGTCGGACCTGATCGGGCTGAAAGTCGTCAACCGGGAAGGCATCGAACTGGGCACGGTCGACAGCCTGATGGAAAGCGGCGCGAACGACCTGCTGGTCGTCAAGGGTACGCGCGAACACCTGATTCCGTTCGTCGCGGCCTTCGTCGGCAAGGTGGATCAGACGGGCAGAACGATCGAGGTGGACTGGGGCGAAGATTACTGA
PROTEIN sequence
Length: 116
VEAVQDHGKALVAKLAGIDDRDTAYALRGQEISVAKSALPPPGENEFYWSDLIGLKVVNREGIELGTVDSLMESGANDLLVVKGTREHLIPFVAAFVGKVDQTGRTIEVDWGEDY*