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SCNpilot_BF_INOC_scaffold_33296_3

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 506..913

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator id=12495572 bin=THIO_HI species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 136.0
  • Bit_score: 265
  • Evalue 2.20e-68
Putative transcription regulator with HTH domain {ECO:0000313|EMBL:EGW23209.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 134.0
  • Bit_score: 208
  • Evalue 5.80e-51
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 133.0
  • Bit_score: 154
  • Evalue 2.00e-35

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Taxonomy

Methylobacter tundripaludum → Methylobacter → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGAACGCACGACTGGATGCCGCACTGGCGCACTGGAACTACATTGCACCGCTGCTGACCCCGGCCACTACCGAGGCAGAATATCAGGCGCTGGTTGAATCGCTGGACACGGTTCTGGATGCAGGTGGGGCGGACGAGATGCACCCGTTGGCCGGGCTGGCGGTGATGCTGGGCGATCTGGTGTCGGCCTGGGAGCATACGCATTACCCCATGCCGCCTGAAATGAGCGGAGTGGAGGTATTGCGTTTCTTGATGTCGCGTAACGGCCTGCGCCAGTCAGATTTGCCGGAGATCGGCAATCAGGCCAAGGTGTCCGAAATTCTCTCGGGCAAGCGGGAAATCAACCTGCGTCAGGCAAAGGCTTTAGCGGCGCGCTTCGGTGTACCGATTGGCTTGTTTGCCGATTAG
PROTEIN sequence
Length: 136
MNARLDAALAHWNYIAPLLTPATTEAEYQALVESLDTVLDAGGADEMHPLAGLAVMLGDLVSAWEHTHYPMPPEMSGVEVLRFLMSRNGLRQSDLPEIGNQAKVSEILSGKREINLRQAKALAARFGVPIGLFAD*