ggKbase home page

SCNpilot_BF_INOC_scaffold_3372_4

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 1591..1980

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR id=12494363 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 248
  • Evalue 2.70e-63
biopolymer transport protein ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 129.0
  • Bit_score: 204
  • Evalue 1.60e-50
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:AAZ98161.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 129.0
  • Bit_score: 204
  • Evalue 8.00e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCCCAGATCAACGTCGTGCCGATGATCGACGTGATGCTGGTGCTGCTGGTGATTTTCATGGTGACCGCGCCTTTCATCAACCCGGCCCAGGTCGAGTTGCCGAGTGTCGGCAAGACCTCGCAGGCGCCGCAGAAACCGCTCGAAATCATCATCAGGGAATCGGGTGAATATCTGTTGCGCAACCGCGCGGCGGGAGGCAGCGAGCGGGTCGTGGCGAAATCGGCGCTCGCTGACGAACTTGCCGGATTGCATCGCGAACAGCCCGACCAGCCGGTCGTCATCGCGGCGGACAAGAACGTCCGCTACGAGGAAGTGATGCATACCATGACGCTCCTGCAGCAGGCCCGGATTACACGTATCGGCCTGCTTGCCCGCCCGGCGCCATGA
PROTEIN sequence
Length: 130
MAQINVVPMIDVMLVLLVIFMVTAPFINPAQVELPSVGKTSQAPQKPLEIIIRESGEYLLRNRAAGGSERVVAKSALADELAGLHREQPDQPVVIAADKNVRYEEVMHTMTLLQQARITRIGLLARPAP*