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SCNpilot_BF_INOC_scaffold_3301_9

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 5674..5919

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq; K03666 host factor-I protein id=12493081 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 82.0
  • Bit_score: 159
  • Evalue 1.30e-36
RNA-binding protein Hfq; K03666 host factor-I protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 81.0
  • Bit_score: 157
  • Evalue 9.20e-36
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 79.0
  • Bit_score: 151
  • Evalue 1.30e-34

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGCCAGCAAAGAATACAACCACCTGCAAGACGTTTTCCTCAACACCCTGCGCAAGGAACGCATCCCTGTGTCGGTGTTTCTCGTCAACGGAATCAAGCTCATGGGACGAATTGAATCGTTCGACCAGTTCGTGGTCCTGCTGAAAGGCCAGGACCAGGCAGCCCAGATGATCTTCAAGCACGCCATCTCAACCATTTCGCCTTCGCGCGAAGTGGTCCTGCCGCAACGCGATACCGAGGCCTGA
PROTEIN sequence
Length: 82
MASKEYNHLQDVFLNTLRKERIPVSVFLVNGIKLMGRIESFDQFVVLLKGQDQAAQMIFKHAISTISPSREVVLPQRDTEA*