ggKbase home page

SCNpilot_BF_INOC_scaffold_3201_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(2766..3146)

Top 3 Functional Annotations

Value Algorithm Source
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=12495331 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 227
  • Evalue 6.20e-57
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 126.0
  • Bit_score: 217
  • Evalue 1.50e-53
rplL; 50S ribosomal protein L7/L12 similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 127.0
  • Bit_score: 213
  • Evalue 3.40e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCTGTTGCAAAAGCTGACATTCTGGATGCCATCGCAGGCATGACCGTCCTTGAGTTGTCCGAACTCATCAAGGAAATGGAAGAGAAATTCGGCGTTTCCGCCGCTGCCGCCGCTGTGGCCGTGGCCGCGCCGGCTGCTGCCGGTGGCGCCGCCGCCGCCGAGGAGCAGACCGAATTCACCGTGATGCTGAACTCCGCTGGCGAGAAGAAAGTGGAAGTCATCAAGGTGGTGCGCGCCGCGACCGGTCTGGGCCTGAAAGAAGCCAAGGACCTGGTCGACGGTGCCCCCAAGGCCGTCAAGGAAGGCGTCTCCAAGGCCGACGCCGACGCGCTGAAAAAACAGCTGGAAGAAGCGGGCGCGGGCGTCGAAGTCAAATAA
PROTEIN sequence
Length: 127
MAVAKADILDAIAGMTVLELSELIKEMEEKFGVSAAAAAVAVAAPAAAGGAAAAEEQTEFTVMLNSAGEKKVEVIKVVRAATGLGLKEAKDLVDGAPKAVKEGVSKADADALKKQLEEAGAGVEVK*