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SCNpilot_BF_INOC_scaffold_3471_11

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(7663..8259)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12493448 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 389
  • Evalue 1.90e-105
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 389
  • Evalue 2.70e-105
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 198.0
  • Bit_score: 373
  • Evalue 4.00e-101

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGTCGGACCGCGAACTGGATCAGGTGCTGGTCGAACGCGCCCAGCAGGGCGACAAACACGCTTTCGAGTTGTTGGTGAGCAAATATCACCGCAAGCTCGGGCGGTTGTTGTCGCGCATGGTGCGGGACGCCGCGGAGGTGGAAGACATTACACAGGAAGCGTTTATCAAGGCCTACCGCGCGCTGCCGGGGTTCCGTGGCGAAAGCGCCTTCTATACCTGGCTGTATCGTATTGCCGTGAATACCGCCAAGAACTATCTGGTGGCCCACAAGCGCATGCCGGTATCGAGCGACGTGCAGGCGGAAGATGCGGAGAATTACGAGGATGGCGATCTGCTGCGCGATATTGCAACGCCGGATGCGGAACTCCAGACCAAACAGATCGCCAAAGCAGTCAATGAGGCGGTCGATGCGCTGCCCGAGGAACTGAGGACGGCGATCACGCTGCGCGAGATCGAAGGCATGAGTTACGAGGAGATCGCACAGATGATGGACTGCCCGATCGGCACCGTCCGCTCGCGGATTTTCCGCGCGCGCGAGGCCATTGCCGAAAAGATACGCCCGATGCTGGGCACCAGTCAGGACAAAAGGTGGTAA
PROTEIN sequence
Length: 199
MSDRELDQVLVERAQQGDKHAFELLVSKYHRKLGRLLSRMVRDAAEVEDITQEAFIKAYRALPGFRGESAFYTWLYRIAVNTAKNYLVAHKRMPVSSDVQAEDAENYEDGDLLRDIATPDAELQTKQIAKAVNEAVDALPEELRTAITLREIEGMSYEEIAQMMDCPIGTVRSRIFRAREAIAEKIRPMLGTSQDKRW*