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SCNpilot_BF_INOC_scaffold_3422_10

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 7808..8047

Top 3 Functional Annotations

Value Algorithm Source
MscS mechanosensitive ion channel:conserved TM helix; K03442 small conductance mechanosensitive channel id=12493418 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 62.0
  • Bit_score: 123
  • Evalue 8.00e-26
MscS mechanosensitive ion channel:conserved TM helix; K03442 small conductance mechanosensitive channel Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 62.0
  • Bit_score: 113
  • Evalue 1.90e-22
MscS mechanosensitive ion channel:conserved TM helix similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 61.0
  • Bit_score: 72
  • Evalue 7.70e-11

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGGACGAACCACTGCAAACACTGACATACGCCCGGAAGACCGCGATCGAACTGGCCATCCAGTTCGGCCCCAAGCTGCTGGTGGCGTTGCTGATCCTGGCGGCGGGCTATTACGTCGGGCGCTGGGTGGGCAGGCTGGCCGACTCGATGCTGGCGAAACTCGGGCTCGACGAGCCTCTGCGCGTGCCCTGTTCCTCATCATGGCGCTGCAGAACCTGGGCGTGCAGCTGTTGCCGCTGA
PROTEIN sequence
Length: 80
MDEPLQTLTYARKTAIELAIQFGPKLLVALLILAAGYYVGRWVGRLADSMLAKLGLDEPLRVPCSSSWRCRTWACSCCR*