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SCNpilot_BF_INOC_scaffold_3497_14

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 10383..12113

Top 3 Functional Annotations

Value Algorithm Source
carbamoyl-phosphate synthase L chain, ATP-binding; K03086 RNA polymerase primary sigma factor Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 591.0
  • Bit_score: 1060
  • Evalue 0.0
RNA polymerase sigma factor id=1320209 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 591.0
  • Bit_score: 1060
  • Evalue 0.0
carbamoyl-phosphate synthase L chain, ATP-binding similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 590.0
  • Bit_score: 1059
  • Evalue 0.0

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
GTGGCTGTACGTGGAAGAAAACCAGGTGGTGGCGCCAAAAAACCCGAAGCGCTGCTCCCCCTGAAAGAGTTGACGCCGGTGGAAGCCGAGGCGCGCCGCACCCAGTTGAAGAACCTCATCATCCTCGGCAAGGAACGGGGCTTCCTGACTTACGCCGAAATCAACGACCACCTGCCCGACGAGGTGCTGGACGCCGACCAGATCGAAGGCGTGATCAGCATGATCAACGATATGGGCATCCAGGTCTACGACGAGGCGCCGGACGCCGAAACCCTGCTGATGCAGGAAGCCCAGGCCTTGACGACCGTCGATTCCGAATTCGGCCGCACCACCGATCCGGTGCGCATGTACATGCGTGAGATGGGTTCGGTCGACCTGCTCACCCGCGAGGGCGAAATCGAAATCGCCAAGCGCATCGAGGAAGGCCTGCGCCACATGGTGCAGGCCATTTCGTCGTGCCCGCTCACCATCCAGCAGATTCTGGACATGGCGACGCAGATCGAAAAAGACGAGATGCGCATCGACGAACTGATCGACGGCTTCGTCGAAACGGAAACCGAAGCCGCGACGGAAGAGGACGAAGCGTCTGCCGAGGAAGAAGACACGGACGAGGACGATGAGGAGGCCAGCGCCAAACTCGCGGCAGCCAATCTGGCCCAGCTCAAGGCCGAAGCGCTCGCGCAATTCGACTTCATCCGGAAAGCCTACAAGAAGGCACAAACCGCCCACGCCAAGTATGGTCTTGGCAGCGCGCAGCACATGAAGGCACAATCTGAAGTCACCGAACTTCTGATGGCGATCCGCTTCTCTGTTCGCCAGGTGGACAGCCTGTGCGAACAGATCCGCAATGCGGTGGAGGAAGTGCGCTCGCATGAACGCAAGATCATGGAGTTCTGCGTCACCCGCTCGGGCATGCCGCGCCCGCACTTCATCAAGGCCTTCCCCGGCAACGAGACCAACCTGACCTGGCTGGACAAGGAAATCGCCGCCAAGAAAGCCTACTGCTCGACGCTTGCCAAAGTGCAGTATGAGATCAAGGCGCACCAGGAAGCGCTCATCGCGATGCAGGATCGGGTCGGCCTGCCGATCAGGAACCTGAAGGACATCAACAAGCAGATGTCCACCGGCGAGGCCAAAGCGCGCCGCGCCAAGCGCGAGATGATCGAGGCCAACCTGCGCCTGGTCATCTCGATCGCCAAGAAATACACCAACCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAACATCGGTCTGATGAAGGCGGTCGACAAGTTCGAATACCGTCGCGGCTACAAGTTCTCGACCTATGCGACCTGGTGGATCCGTCAGGCGATCACGCGTTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAAACCATCAACAAGATGAACCGGATCAGCCGCCAGATCCTGCAGGAAACCGGCATCGAGCCCGATCCGGCGACGCTGGCGATCAAGATGGAAATGCCGGAAGACAAGATCCGCAAGATCATGAAAATCGCCAAGGAGCCGATTTCGATGGAGACACCGATCGGCGACGACGAGGATTCCCACCTCGGCGACTTCATCGAGGACTCCAGCACGCTGTCGCCCGACGACTCCGCGATCTACGCCAACCTGCGCGACGCCACCCGCGAAGTGCTGGACAGCCTGACCTCGCGCGAAGCCAAGGTATTGCGCATGCGCTTCGGCATCGAAATGAAATGA
PROTEIN sequence
Length: 577
VAVRGRKPGGGAKKPEALLPLKELTPVEAEARRTQLKNLIILGKERGFLTYAEINDHLPDEVLDADQIEGVISMINDMGIQVYDEAPDAETLLMQEAQALTTVDSEFGRTTDPVRMYMREMGSVDLLTREGEIEIAKRIEEGLRHMVQAISSCPLTIQQILDMATQIEKDEMRIDELIDGFVETETEAATEEDEASAEEEDTDEDDEEASAKLAAANLAQLKAEALAQFDFIRKAYKKAQTAHAKYGLGSAQHMKAQSEVTELLMAIRFSVRQVDSLCEQIRNAVEEVRSHERKIMEFCVTRSGMPRPHFIKAFPGNETNLTWLDKEIAAKKAYCSTLAKVQYEIKAHQEALIAMQDRVGLPIRNLKDINKQMSTGEAKARRAKREMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGIEPDPATLAIKMEMPEDKIRKIMKIAKEPISMETPIGDDEDSHLGDFIEDSSTLSPDDSAIYANLRDATREVLDSLTSREAKVLRMRFGIEMK*