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SCNpilot_BF_INOC_scaffold_4012_3

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(1819..3054)

Top 3 Functional Annotations

Value Algorithm Source
acrA1; cation/multidrug efflux system, mebrane-fusion component AcrA; K07799 putative multidrug efflux transporter MdtA id=12493015 bin=THIO_HI species=Curvibacter lanceolatus genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 412.0
  • Bit_score: 797
  • Evalue 8.30e-228
RND transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 421.0
  • Bit_score: 401
  • Evalue 3.80e-109
RND transporter MFP subunit {ECO:0000313|EMBL:AGW88962.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia picket similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 421.0
  • Bit_score: 401
  • Evalue 1.90e-108

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Taxonomy

Ralstonia pickettii → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGGGTTCCTCCGCCGCGCCGCCTCTCCGCCCACGCCACCCCGTCCGTACCGCCCTGATCGCCGCCGTGCTGGCCGGCCTGATCGGCGGGGTCTGGTACTGGAGCGATCACCCTGCCCAGCCATCCGCTGCCCCGGGTGCGGAGAAAAAAGGCCGCAAAGGCGCGGGCAACAGCCATCCGCAACCGGTTTCGGTGGCGGCAGCCCGTAAAACCGATATCCGTGTCTGGCTGAATGCCCTCGGCACGGTCACCCCCGTCGATCTGGTCACCGTCCACGCCAAGGTCGACGGCACGCTGCTCAGCGTAAATTTCCGCGAAGGCCAGATGGTCAGGGCGGGGGAACTGCTGGCCCGGATCGACCCACGCCCTTTCCAGATCCAGCTCGACCAGGCCAGCGGACAGTTGCAGCGCGACAGCGCGCTGCTCGACAACGCCCGCATCGACCTCGCCCGCTACCGGCAGCTCCTCGCCAAGGACGCCATCGCCAGCCAGCAGGTGGATACCCAGGATGCCCTCGTGCGCCAGTATCAGGGCACGGTGGAGACGGATCGCAGCCAGGTGGACAATGCCAGGCTGCAACTGGAATGGACCCGCGTCGTCGCCCCGTCATCCGGCCGCATCGGCCTGCGCCAGATCGACCCCGGCAACCAGGTGCACGCAAACGATGCCAACGGGCTGGCCAGCATTGCCCGGTTGCAGCCGACCACCGTGCTGTTCGCCGTGCCGGAGGCGAATCTGGCGGCCATCCACCGCGGAGCATCGGCGCATGACGCCCTCCACGTCGAAGCCTGGGACCGCGAGCAGAAAAACCACCTGGCGGATGGCCAGCTCCTCACGACCGATAACCAGATCGATACGGCCACGGGCACCCTCAGGATCAGGGCCGGATTCGCCAATCGCGACAACGCACTGTTCCCCAACCAGTTCGTCAACATCCGTCTGCTGCTGGGCACGCTGCCCCAGGTGCTTGCCGTGCCGGCCGCAGCGATCCAGCGTGGCGAGCAAGGCAGCTTCGTCTACCGCGTCAACGCGGACGGCATCGTAGCGAGGGTTGCGGTCGTGCCCGGCGCGCAGGATGGGGACTGGGTGGCCATCGAGGGCACGATCGAGGCCGGGGACAGGGTGGTGATCGACGGCACCGACAAACTGCGCGACGGCGCCAGGGCCGAGATCATCGTTCCCGGCAGCCCGGCCCGGGGGCGCAAGCCGGCGATCAGGTCCGGGCAGCAATCGTGA
PROTEIN sequence
Length: 412
MGSSAAPPLRPRHPVRTALIAAVLAGLIGGVWYWSDHPAQPSAAPGAEKKGRKGAGNSHPQPVSVAAARKTDIRVWLNALGTVTPVDLVTVHAKVDGTLLSVNFREGQMVRAGELLARIDPRPFQIQLDQASGQLQRDSALLDNARIDLARYRQLLAKDAIASQQVDTQDALVRQYQGTVETDRSQVDNARLQLEWTRVVAPSSGRIGLRQIDPGNQVHANDANGLASIARLQPTTVLFAVPEANLAAIHRGASAHDALHVEAWDREQKNHLADGQLLTTDNQIDTATGTLRIRAGFANRDNALFPNQFVNIRLLLGTLPQVLAVPAAAIQRGEQGSFVYRVNADGIVARVAVVPGAQDGDWVAIEGTIEAGDRVVIDGTDKLRDGARAEIIVPGSPARGRKPAIRSGQQS*