ggKbase home page

SCNpilot_BF_INOC_scaffold_5844_4

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(1550..1861)

Top 3 Functional Annotations

Value Algorithm Source
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha id=12495538 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 104.0
  • Bit_score: 201
  • Evalue 3.90e-49
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 103.0
  • Bit_score: 199
  • Evalue 2.10e-48
ihfA; integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 103.0
  • Bit_score: 196
  • Evalue 2.70e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGCCACTCTCACCAAAGCTGATCTAGCTGAACTGCTGTTTGAAAAAGTGGGTTTGAACAAACGCGAGGCGAAGGATGTCGTCGAGTCGTTTTTCGACGAAATCCGTCTGTCGCTCGAAAAGGGGGATATCGTCAAACTGTCCGGGTTCGGGAATTTCCAGTGTCGCGAGAAACCGCAGCGCCCTGGCCGCAACCCCAAAACCGGCGAGGAAATGCCGATTTCCGCGCGTCGCGTGGTGACCTTCCACGCCAGCCAGAAACTCAAATCGCAAGTCGAAGGCGCCCAAATTGGAACGCCCGGCACGGAGTGA
PROTEIN sequence
Length: 104
MATLTKADLAELLFEKVGLNKREAKDVVESFFDEIRLSLEKGDIVKLSGFGNFQCREKPQRPGRNPKTGEEMPISARRVVTFHASQKLKSQVEGAQIGTPGTE*