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SCNpilot_BF_INOC_scaffold_8983_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 17..1831

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase protein SecD; K03072 preprotein translocase subunit SecD id=12493433 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 605.0
  • Bit_score: 1154
  • Evalue 0.0
preprotein translocase SecD similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 604.0
  • Bit_score: 1036
  • Evalue 0.0
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 604.0
  • Bit_score: 1036
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1815
ATGAACCGTTTCCCGACCTGGAAATATGTGCTCATCGGCGTCATCCTGGTGATCGCCTTCCTCTATACCCTGCCCAATTTCTTTGGCGAAGTGCCGGCGGTGCAGATTTCCCCCACGCGCACGACCGAAAAAGTCGACACTGCGCTGCTGAGCCAAGTGGAATCCTCGCTGAAAGCGGCCGGCCTGGGCTACCAGGGGGTGGAACTGGCGGGGAACAGCATCAAGGTGCGCCTGATCAGTACCGACATGCAGATCAAGGCCAAGGACGTGCTGCAGAACACCCTGGGTGAACGCTATACCGTCGCGCTCAACCTGGTATCGGCCTCGCCCGCGTGGCTCGCATCGATTCATGCACTGCCGATGTATCTGGGCCTGGACTTGCGGGGTGGCGTGCATTTTCTGCTTGAAGTCGATATGAAGGCCGCACTGGAAAAAGCGGCTATCCGCTACCAGAACGATTTCCGTACTGAATTGCGCGGCGAGAAGATCCGCTATGGACGCATCACCCGCGTGGGCAACGCCGTCACCGTGCATTTCGCCACGCGCGACCAGCGCGATGCGGCGGCCAACAAACTGGGCACCGCGTTCACCGACCTCGCCTTTACTCCCGAAGACCAGGCCGAAGGCTTCACCCTGACCGCGCGCCTGAAACCGCAGGCCCAAACCAAGGTGCAGGAATTCGCCCTGCAGCAAAACATCACCACGCTCAGGAACCGCGTCAACGAACTTGGCGTGGCCGAACCCGTCATCCAGCAGCAGGGTGCCAGCCGCGTCGTGGTGCAGCTGCCGGGCGTGCAGGACACCGCCAAGGCCAAGGACATTCTCGGCCGCACGGCCACGCTGGAAATCCGCATGGTCGACGAGCAGGCCGACCCGACGGCCGTCCAGCAGGGCCAGGCTCCGTTTGGCGACGATATCGTGTCCAGCCGCGAAGGCGGGAAAATCGCCGTGAAGAAGGACGTGGTGCTGACCGGCGACTCGATCACCGATGCCTCCCCGGGCTTTGACGGCACCAGCGGCCAGGCTGCCGTCCACATCAATCTGGACGGCAAGGGCGCGCGCGTGTTCAAGGACGTGACGCGCGAGAACGTCGGCAAGCGCATGGCCATCCTGCTGATCGAAAAGGGGGTGGCCGAAGCCATTACCTCGCCGGTCATTCGCGAGGAAATCGGCGGCGGCCGCGTGCAGATCACCGGCATGGAATCCGCGCAGGAAGCCTCCGACGTTGCCCTGCTGCTGCGCGCCGGCGCGCTCGCCGCTCCGATGCAGATCGTCGAGGAGCGTACCGTCGGGCCGAGCATGGGCGCCGAAAACATCAGCAAGGGTTTCCATTCGAACCTCTGGGGCTTCCTCACGGTGGTCGCGTTCATGACCTTCTACTACCGTGTGTTCGGTCTGTTCTCCTCGATCGCACTGGCGATCAACGGCCTCTTCCTCATCGCGCTGCTGTCGATGCTGCAGGCGACGCTGACCCTGCCCGGCATGGCGGCGATCGCGCTCACACTGGGCATGGCGATCGACGCCAATGTGCTGATCAACGAACGCGTGCGGGAAGAACTGCGTAACGGCGCCACGCCGCAGGCGGCGATCCACGCCGGCTACGAGCGCGCATGGGCGACGATTCTCGACTCCAACATCACCACGTTGATCGCCGGTATCGCGCTGTTCTGGCTGGGTTCCGGGCCGGTGCGCGGCTTCGCCGTGGTACTTTGCCTGGGTATTCTCACTTCCATGTTCAGCGCGGTGACCGTATCGCGCGCGATGGTCAATCTCACCTACGGCCGCCAGCCGCGTCTGGCCAAGGTCTCGATTTAG
PROTEIN sequence
Length: 605
MNRFPTWKYVLIGVILVIAFLYTLPNFFGEVPAVQISPTRTTEKVDTALLSQVESSLKAAGLGYQGVELAGNSIKVRLISTDMQIKAKDVLQNTLGERYTVALNLVSASPAWLASIHALPMYLGLDLRGGVHFLLEVDMKAALEKAAIRYQNDFRTELRGEKIRYGRITRVGNAVTVHFATRDQRDAAANKLGTAFTDLAFTPEDQAEGFTLTARLKPQAQTKVQEFALQQNITTLRNRVNELGVAEPVIQQQGASRVVVQLPGVQDTAKAKDILGRTATLEIRMVDEQADPTAVQQGQAPFGDDIVSSREGGKIAVKKDVVLTGDSITDASPGFDGTSGQAAVHINLDGKGARVFKDVTRENVGKRMAILLIEKGVAEAITSPVIREEIGGGRVQITGMESAQEASDVALLLRAGALAAPMQIVEERTVGPSMGAENISKGFHSNLWGFLTVVAFMTFYYRVFGLFSSIALAINGLFLIALLSMLQATLTLPGMAAIALTLGMAIDANVLINERVREELRNGATPQAAIHAGYERAWATILDSNITTLIAGIALFWLGSGPVRGFAVVLCLGILTSMFSAVTVSRAMVNLTYGRQPRLAKVSI*