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SCNpilot_BF_INOC_scaffold_9576_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 1127..4222

Top 3 Functional Annotations

Value Algorithm Source
mdtC; multidrug efflux system, subunit c; K07789 RND superfamily, multidrug transport protein MdtC id=12493969 bin=THIO_HI species=blood disease bacterium R229 genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 999.99
  • Bit_score: 1972
  • Evalue 0.0
mdtC; multidrug efflux system, subunit C similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 999.99
  • Bit_score: 1364
  • Evalue 0.0
Multidrug efflux system, subunit C {ECO:0000313|EMBL:CBJ35560.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sol similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 999.99
  • Bit_score: 1364
  • Evalue 0.0

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3096
ATGAACGCCTTCGCCATCTTCATCCATCGGCCCATCGCCACCACGCTGCTGACGCTGGGCATCGTCCTCGCCGGCATGATGGCGTATTTCAATCTGCCGGTGGCGCCCCTGCCGCAGGTGGATTTTCCGACCCTCTCGGTGCAGGCCTCGCTCCCCGGCGCCAGCCCGGAAACGATGGCGGCAACGGTCGCCACGCCACTGGAACGCACCCTGGGCCGGATCGCGGGGGTGACCGAAATCACGTCGTCGAGTTCGCTCGGCAGCACCCGCGTGGTCCTGCAATTCGATCTCGACCGCGACATCGACGGCGCGGCGCGCGACGTGCAGGCGGCCATCCAGGCTTCCCGTGCGCTGCTGCCGTCCGGCCTGCCGTCGATGCCGACCTACCGCAAGCTCAACCCGGCCGATGCGCCGATCATGATTCTGTCGCTGACCTCCGATACGTTGACGCCGGGGCAGATGTACGACGCCGCGTCCACCGTGCTGGCGCAGCGGCTGTCGCAGATCGACGGCATCGGCCAGGTCAACATCGGCGGCGGCGCCCTGCCTGCGGTGCGGGTCGAGCTGAACCCGACCGCGCTCAACCACAGCGGCCTGTCCCTCGACAAGGTGCGCGCCGCCATCGTCGCCAGCAATGCCTACCGCCCGCTGGGCACACTGGAAGACGGCGGCCGCCACTGGCAGCTCGGCTCCAGCGACCAGGGCCGCACGGCGGCGGACTTCAAGCCGTTGATCCTGAGCTACGTCAACGGCGCGCCGTTACGCCTGCAGGATGTCGCCGATGTGCACGATTCGGTCCAGGACGTCCGTCACTTCGGTGCCGCCAACAGCCGGCCGGCCGTGCTGCTGATCCTCTACCGCCAGCCCGGCGCCAACATCATCCAGACCGTCGACAGCGTGCGCGCGCTGCTGCCGCGCCTGCGCGCGGTCATTCCCGCAGCGATCGATCTTGACGTGGTGATGGACCGCACGCCGACCATTCGCGGCTCCCTGCGCGAGGTGCAGCGCACCCTGGCGATCGCGGTCGGCCTGGTGATCCTGGTGGTGTTCCTGTTCCTGCGCCGCGCGCGCGCCGCGATGATTCCCACCGTCGCCGTGCCGGTGTCGCTGATCGGCACCTGCGGCGTGATGTATCTGGCCGGCTACAGCATCGACAACCTGTCGCTGATGGCGCTGACCGTGGCCACCGGCTTCGTGGTCGACGACGCCATCGTGGTGACGGAGAACATCACGCGACATCTTGAGTCCGGCATGAAGCCCTTCGCGGCTGCGCTGGCTGGCGTGCGCGAGATCGGCTTCACGGTGGTGTCGATCAGCCTGTCGCTGGTGGCGGTGTTCATTCCCATCCTGTTCATGGGCGGCATCGTCGGCCGCCTGTTCCGCGAATTCGCCGCCACCCTGTCGGCCGCCATCCTGGTGTCGATGGTGGTCTCGCTCACCACCACGCCGATGCTGTGCGCGCATTGGCTCAAGGCCCCGCCGCCCGACACCGCGCCCGGTCCATGGGCACGCTGGAATGCGCGCCTGCTGCGCCGGCTCAAGCGCGGCTACCGTGCCAGCCTGGCCTGGTCGCTGCGCCACAGTGCCTTGATGCTGGCGCTGCTGGGCCTGACCGTCGCGCTCAACGTGCACCTGTACACGGCCATCTCGAAAGGCTTCTTTCCCACCCAGGATACCGGCCGCATCATGGGCGGGGTGAAGGCGGACCAGAGCATTTCCTTCACGGCGATGCGCCAGAAAATGCTTGATCTCATGCGTATCGTCCAGCGCGACCCGGCGGTGGATACCGTGGTCGGCTTTACCGGCGGCGGACAAACCAATTCCGGCTTCATGTTCGTCACCCTCAAGCCGCTGGGCACGGGCCGGCCATCGGCCGACAAGGTGGTGGCGCGGCTGCGCGGCAAGCTGGCGCACGAACCCGGTGCCAGTCTGATCCTGAATCCCGCGCAAGACGTGCGCATCGGCGGCCGGCAAAGCGACGCCACCTATCAATACACGCTGCAGGCCGACCGCCTGACCGACCTGCGTGCCTGGGAGCCCCGCGTCCGGCGTGCCCTGATGGACCTGCCCGAGCTGACCGACGTCAACAGCGATCAGCAGAACAAGGGCCTGCAGACCCGCCTGGTGTTCGATCGCGACCGCATGGCGAGTCTCGGGCTGACCATGAGCGCCGTCGATTCCACCCTCAACAGCGCCTTCGGCCAGCGCCAGGTGTCGGTGATCTACAATCCGCTCAACCAGTATCGTGTGGTCATGGAACTGGCGCCGGCCTGGCTGACCAGCCCGGAATCGCTGCGCTCGATCTGGTTCAGCACGCCGGGCGGCGGCCAGGTGGCCCTGTCCGACATCGCCCGTCTCGAGACGGCGAATGCCCCGCTGGCGATCAATCACCAGGGCACGTTCCCCGCCAGCACCCTCAGCTTCAACCTGCCGCCGGGCGTGTCGCTGGGCGCGGCGTCCGCCGCCATCGACCGCACCCTCGCCAGCATCGGCGCGCCCACCTCGGTGCACGGCGGTTTCCAGGGTACGGCCCGGGCTTTCCAGGATTCGCTGTCCAGCCAGCCGATCCTGATCCTCACGGCGCTGCTGACGGTCTACATCGTACTGGGCATCCTCTACGAGAGCCTCATCCACCCGATCACCATCCTCTCCACCCTGCCCTCGGCGGGCGTGGGCGCGCTGCTGGCCCTGATGGCCTTCGGCAATGAGTTCAACGTCATCGCCCTGATCGGCGTCATCCTGCTGATCGGCATCGTCAAGAAGAACGCCATCCTGATGATCGACTTCGCCATCCACCGCCAGCGCCAGCACGGCGTCAGCGCGGCGCGCGCCATCTACCGTGCCGCGCAGATGCGCTTCCGGCCGATCATGATGACCACCCTCGCCGCCACCTTCGGCGCCGTCCCGCTGGCGCTGGGCAGCGGCGACGGCGCCGAGCTGCGCAACCCGCTCGGCATCGCCATCGTGGGCGGCCTGCTGGTCAGCCAGCTGCTGACCCTCTACACCACGCCGGTGGTCTATCTGTTGATGGACCGCCTGCGCAACCTGGTCATGCGCCGCGCCGCGCCGACGGTGCCGGCCATGTACCCTGCCTGA
PROTEIN sequence
Length: 1032
MNAFAIFIHRPIATTLLTLGIVLAGMMAYFNLPVAPLPQVDFPTLSVQASLPGASPETMAATVATPLERTLGRIAGVTEITSSSSLGSTRVVLQFDLDRDIDGAARDVQAAIQASRALLPSGLPSMPTYRKLNPADAPIMILSLTSDTLTPGQMYDAASTVLAQRLSQIDGIGQVNIGGGALPAVRVELNPTALNHSGLSLDKVRAAIVASNAYRPLGTLEDGGRHWQLGSSDQGRTAADFKPLILSYVNGAPLRLQDVADVHDSVQDVRHFGAANSRPAVLLILYRQPGANIIQTVDSVRALLPRLRAVIPAAIDLDVVMDRTPTIRGSLREVQRTLAIAVGLVILVVFLFLRRARAAMIPTVAVPVSLIGTCGVMYLAGYSIDNLSLMALTVATGFVVDDAIVVTENITRHLESGMKPFAAALAGVREIGFTVVSISLSLVAVFIPILFMGGIVGRLFREFAATLSAAILVSMVVSLTTTPMLCAHWLKAPPPDTAPGPWARWNARLLRRLKRGYRASLAWSLRHSALMLALLGLTVALNVHLYTAISKGFFPTQDTGRIMGGVKADQSISFTAMRQKMLDLMRIVQRDPAVDTVVGFTGGGQTNSGFMFVTLKPLGTGRPSADKVVARLRGKLAHEPGASLILNPAQDVRIGGRQSDATYQYTLQADRLTDLRAWEPRVRRALMDLPELTDVNSDQQNKGLQTRLVFDRDRMASLGLTMSAVDSTLNSAFGQRQVSVIYNPLNQYRVVMELAPAWLTSPESLRSIWFSTPGGGQVALSDIARLETANAPLAINHQGTFPASTLSFNLPPGVSLGAASAAIDRTLASIGAPTSVHGGFQGTARAFQDSLSSQPILILTALLTVYIVLGILYESLIHPITILSTLPSAGVGALLALMAFGNEFNVIALIGVILLIGIVKKNAILMIDFAIHRQRQHGVSAARAIYRAAQMRFRPIMMTTLAATFGAVPLALGSGDGAELRNPLGIAIVGGLLVSQLLTLYTTPVVYLLMDRLRNLVMRRAAPTVPAMYPA*