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SCNpilot_BF_INOC_scaffold_1886

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1886_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..640
DNA (639bp) protein (213aa)
heme biosynthesis protein HemY n=1 Tax=Thiobacillus thioparus RepID=UPI0003752DAF
HesA/MoeB/ThiF family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
HesA/MoeB/ThiF family protein
SCNpilot_BF_INOC_scaffold_1886_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(673..876)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C923E
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_1886_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(873..1424)
DNA (552bp) protein (184aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Thiobacillus thioparus RepID=UPI000368CFBD
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1886_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1424..2020)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000363AC15
peptidase S16; K07157 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
peptidase S16
SCNpilot_BF_INOC_scaffold_1886_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2017..2634)
DNA (618bp) protein (206aa)
aromatic acid decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
aromatic acid decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] id=12495129 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
aromatic acid decarboxylase
SCNpilot_BF_INOC_scaffold_1886_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2762..3325)
DNA (564bp) protein (188aa)
hypothetical protein; K00805 heptaprenyl diphosphate synthase [EC:2.5.1.30] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
heptaprenyl diphosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FF002
hypothetical protein
SCNpilot_BF_INOC_scaffold_1886_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3306..3671)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E1491
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1886_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3671..4507)
DNA (837bp) protein (279aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Thiobacillus thioparus RepID=UPI0003628061
hypothetical protein; K06958 UPF0042 nucleotide-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1886_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4508..5461)
DNA (954bp) protein (318aa)
HPr kinase/phosphorylase (EC:2.7.1.-); K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
HPr kinase/phosphorylase (EC:2.7.1.-)
HPr kinase n=1 Tax=Thiobacillus thioparus RepID=UPI000382AB09
SCNpilot_BF_INOC_scaffold_1886_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5478..5969)
DNA (492bp) protein (164aa)
PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=GWE1_Thiobacillus_62_9_curated
PTS sugar transporter subunit IIA n=1 Tax=Thiobacillus thioparus RepID=UPI0003735227
PTS IIA-like nitrogen-regulatory protein PtsN
SCNpilot_BF_INOC_scaffold_1886_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6026..6361)
DNA (336bp) protein (112aa)
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003695264
30S ribosomal protein S30P / sigma 54 modulation protein; K05808 putative sigma-54 modulation protein Tax=GWE1_Thiobacillus_62_9_curated
30S ribosomal protein S30
SCNpilot_BF_INOC_scaffold_1886_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6519..7952)
DNA (1434bp) protein (478aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor Tax=GWE1_Thiobacillus_62_9_curated
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003749A25
SCNpilot_BF_INOC_scaffold_1886_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8025..8747)
DNA (723bp) protein (241aa)
ATPase component ABC-type transport system; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1C9A
ABC transporter ATPase
SCNpilot_BF_INOC_scaffold_1886_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8744..9313)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037225EE
OstA-like family protein; K09774 lipopolysaccharide export system protein LptA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OstA-like family protein
SCNpilot_BF_INOC_scaffold_1886_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9285..9860)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003818FED
hypothetical protein; K11719 lipopolysaccharide export system protein LptC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1886_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9907..10233)
DNA (327bp) protein (109aa)
phosphatase KdsC; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=GWE1_Thiobacillus_62_9_curated
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003624EB3
phosphatase kdsC
Displaying 16 items

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