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SCNpilot_BF_INOC_scaffold_1106_25

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(19152..19397)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Thiobacillus RepID=UPI00037A4DDE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 159
  • Evalue 1.80e-36
RNA-binding protein Hfq; K03666 host factor-I protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 81.0
  • Bit_score: 157
  • Evalue 9.20e-36
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 79.0
  • Bit_score: 152
  • Evalue 4.60e-35

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGCCAGCAAAGAATACAACCACCTGCAAGACGTTTTCCTCAACACCCTGCGCAAGGAACGCATCCCGGTTTCAGTGTTTCTCGTGAACGGGATCAAGCTCATGGGACGAATCGAATCGTTCGACCAGTTTGTGGTACTGCTGAAAGGTCAGGATCAGGCCGCCCAGATGATCTTCAAGCACGCCATCTCGACCATTTCGCCCTCGCGCGAAGTGGTCCTGCCGCAACGCGACGCCGAGGCCTGA
PROTEIN sequence
Length: 82
MASKEYNHLQDVFLNTLRKERIPVSVFLVNGIKLMGRIESFDQFVVLLKGQDQAAQMIFKHAISTISPSREVVLPQRDAEA*