ggKbase home page

SCNpilot_BF_INOC_scaffold_10974_7

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 7039..7935

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12495473 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 295.0
  • Bit_score: 512
  • Evalue 3.00e-142
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 298.0
  • Bit_score: 457
  • Evalue 3.20e-126
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthas similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 298.0
  • Bit_score: 457
  • Evalue 1.60e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
GTGAAACCCGCCCGCCAGATCGTCGATGGCGTGCTGCTGCTGAACAAGCCGGTCGGCATTACCTCCAACGCCGCGCTGCAAAAAGCCAAGTGGCTGCTCAACGCCAAAAAGGCGGGGCACACCGGTACCCTCGACCCCTTCGCCGACGGTCTGCTGCCGCTGTGTTTCGGTGAAGCCACCAAGTTTTCCGCCTACCTGCTCGACGCCGACAAGCGCTATCGCGCCGTGCTGCAACTCGGCGTCACCACCGCGACCGGCGATCCGGAAGGCGAGGTGCTCGACACGCGTGAGGTGGCGGTCGGCTGCGACGACATTGCCGCAGTGCTGCCGCGCTTCCTGGGCGAGATCGAGCAGATCCCGCCCATGCACTCGGCGCTCAAGCATCAGGGGCGCCCGCTTTACGAATATGCGCGCGCCGGGATCGAAATCGAACGCCCGCCGCGCAAGGTCACGATCCGCGCGCTGGAGATGGTCGAATGCGCCCCGCCGCGCGTGGTGCTGGATGTGCAATGCACGGCGGGCACCTATATCCGTACCCTGGCGCAGGATATCGGCGCCGCATTGGGATGCGGCGCCCACCTCACCGCGCTGACGCGCACCGCAGCCGGCGGGTTCAGCCTGGATCAGGCCCACGCGCTGGCCGGTCTGGACGCGCTCGACGCCGGCCAGCGTGCCGCCCTCCTGCAGCCCGCAGACTGTCTCGTGGCCCATCTGCCGGCCTTGCAACTTGACGAAGCCGAGACCACGGCCGTGTGCCAGGGACGCAGCATTGCGCATTCCACCCCGCACGCCGGGCTGGTGCGCCTCTATACGCCTGCAAACCGCTTTCTCGGCCTGGCCCAGGCTGACGCCGGCCAGCTGGTCCCCCGCCGCCTGATCGCCACCCAACAGACTTGA
PROTEIN sequence
Length: 299
VKPARQIVDGVLLLNKPVGITSNAALQKAKWLLNAKKAGHTGTLDPFADGLLPLCFGEATKFSAYLLDADKRYRAVLQLGVTTATGDPEGEVLDTREVAVGCDDIAAVLPRFLGEIEQIPPMHSALKHQGRPLYEYARAGIEIERPPRKVTIRALEMVECAPPRVVLDVQCTAGTYIRTLAQDIGAALGCGAHLTALTRTAAGGFSLDQAHALAGLDALDAGQRAALLQPADCLVAHLPALQLDEAETTAVCQGRSIAHSTPHAGLVRLYTPANRFLGLAQADAGQLVPRRLIATQQT*