ggKbase home page

SCNpilot_BF_INOC_scaffold_1143_20

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(18410..18886)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA n=1 Tax=Thiobacillus thioparus RepID=UPI0003626F6A similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 158.0
  • Bit_score: 297
  • Evalue 6.10e-78
GreA/GreB family elongation factor similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 158.0
  • Bit_score: 295
  • Evalue 8.50e-78
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=292415 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 158.0
  • Bit_score: 295
  • Evalue 4.20e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGAGCAAATTTCCCCTCACCGTTGTGGGCGCAGAGAAATTGCGCGTTGAACTGCAACACCTGAAGAGCGTCGAGCGCCCCGCAGTGATCCAGGCGATTGCCGAGGCGCGCGCGCAGGGTGACCTGTCGGAGAACGCCGAATACGATGCCGCCAAGGAAAAGCAAGGGTTCATCGAAGGCCGCATTGCCGACCTCGAAGGCAAGCTGTCCAACGCGCAAATCATCGATCCCACCACGCTGGATGCGGATGGCCGCATTGTTTTCGGCGCCACAGTCGAACTGGAAGACGTCGAATCGGGCGATTCCGTCACGTATCAGATCGTCGGCGACGACGAGGCCGACATCAAGCAGGGCAAGATTTCAGTCTCATCCCCGATCGCACGCGCGCTGATCGGCAAATATGCCGGCGACAGCGTTGACGTCCAGGCGCCGGGCGGCGTGCGTCAATACGAAGTGCTGGACGTGCTGTACAAATAG
PROTEIN sequence
Length: 159
VSKFPLTVVGAEKLRVELQHLKSVERPAVIQAIAEARAQGDLSENAEYDAAKEKQGFIEGRIADLEGKLSNAQIIDPTTLDADGRIVFGATVELEDVESGDSVTYQIVGDDEADIKQGKISVSSPIARALIGKYAGDSVDVQAPGGVRQYEVLDVLYK*