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SCNpilot_BF_INOC_scaffold_11839_3

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 2323..3009

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 229.0
  • Bit_score: 436
  • Evalue 2.20e-119
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 229.0
  • Bit_score: 363
  • Evalue 4.80e-98
shikimate 5-dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003661DB0 similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 229.0
  • Bit_score: 439
  • Evalue 2.40e-120

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGACCGACCGTTACGCCGTATTCGGGCACCCGATTGCCCACTCCAAATCCCCGCAGATCCACACCGCGTTTGCCCGCCAGACCGGCCAGGACATGACGTACGAAGCCATCCTCGCGACGCTCGATGGCTTTGCGGACAGCGTCGCTGCCTTCATCGCGGCAGGCGGGCGCGGCGCCAACGTCACTGTGCCATTCAAGGAAGAAGCCTTCAGACTTGCCAGCCGCCTGAGCCCGCGTGCGCAGCGCGCAGGGGCGGTCAACACGCTGAGCTTCGATGCCGACGGCATCCTCGGCGACAACACCGACGGCGCCGGGCTGGTCGCCGATCTCACTCGCAACCTGCACTGCACGATCGTCGGCAAACGCGTCCTGCTGCTTGGCGCCGGCGGCGCGGCGCGCGGCGTGATCGAACCGCTGCTCGACCAGCAGCCCGCGGCGCTCGTCATTGCCAACCGCACCGTCAGCCGCGCCGAGGAGCTCGCCGAGCTGTTCGGCCGCGGCGTCCGCGCCTGCGGCTTCGACGCAGCCAACACGCCCTTCGACCTCGTCATCAACGCCACCGCCGCCAGCCTCGCCGGCGACCTACCGCCGCTGTCGCCGCGCGTGTTCACCCCGGACACGATGGCCTACGACATGATGTACGGGCGCGACACGCCCTTCCTCGACTTCGCCCGCACGCACGGCGCG
PROTEIN sequence
Length: 229
MTDRYAVFGHPIAHSKSPQIHTAFARQTGQDMTYEAILATLDGFADSVAAFIAAGGRGANVTVPFKEEAFRLASRLSPRAQRAGAVNTLSFDADGILGDNTDGAGLVADLTRNLHCTIVGKRVLLLGAGGAARGVIEPLLDQQPAALVIANRTVSRAEELAELFGRGVRACGFDAANTPFDLVINATAASLAGDLPPLSPRVFTPDTMAYDMMYGRDTPFLDFARTHGA