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SCNpilot_BF_INOC_scaffold_1794_12

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(8245..8610)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator merD n=2 Tax=Rhodocyclaceae RepID=F5RFN2_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 176
  • Evalue 1.60e-41
Transcriptional regulator {ECO:0000313|EMBL:EPZ14118.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.; similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 121.0
  • Bit_score: 176
  • Evalue 2.20e-41
transcriptional regulator MerD similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 121.0
  • Bit_score: 166
  • Evalue 6.00e-39

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Taxonomy

Thauera terpenica → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGAACGCCTACACGGTATCCCATTTGGCCCATGATGCCGGGGTGAGTGTGCATGTGGTGCGCGACTACATGCTGCGTGGATTGTTGCGGCCGGTGGAGCGCACCGCTGGCGGCTATGGCTTGTTCGATGCGGAGGCGTTGCAGCGGTTGTGCTTCGTGCGGGCCGCCTTTGAGGCAGGCATCGGCCTCGACATGCTGACGCGGCTATACCGGGCTCTGGATGCCGCAAACGGCGATGAAGCAGTGGCGCATCTTGCCGACCTGCGCCGACTCGTGGAGCGTCGGCGTCAGGCGTTAACAGACCTGGACGCGCAGTTGACCTTTCAGCTAAACGAGCTGGCGCGCGATGCGGAGGTGTCGCCATGA
PROTEIN sequence
Length: 122
MNAYTVSHLAHDAGVSVHVVRDYMLRGLLRPVERTAGGYGLFDAEALQRLCFVRAAFEAGIGLDMLTRLYRALDAANGDEAVAHLADLRRLVERRRQALTDLDAQLTFQLNELARDAEVSP*