ggKbase home page

SCNpilot_BF_INOC_scaffold_20536_4

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(1601..2320)

Top 3 Functional Annotations

Value Algorithm Source
spermidine synthase (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16] id=12493465 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 257.0
  • Bit_score: 468
  • Evalue 3.00e-129
spermidine synthase (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 256.0
  • Bit_score: 428
  • Evalue 8.30e-117
spermidine synthase (EC:2.5.1.16) similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 249.0
  • Bit_score: 386
  • Evalue 5.60e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCGCTTGAGGTTAGGGAAACGCCGGGCAGACGACGGCGGACTGGAAGTGACCGAGGAACGCGGCCTGCGCGTGTTGCGCCTGGGCAGTCGCGCCATTCAGAGCGCGATGCGGGTGAATCGGCCGTGGGACCTGGAGCTCGCGTACACACGTGCCATGATGGGCTTCCTGATGTTCAACCCGCTGCCGCAGGAGGTGCTGATGATCGGCCTCGGCGGTGGCTCGCTCGCCAAATTCATCCGCAAGCAGCGGCCGCAGACGCGCATCACCGCGGTGGAAATCGATCCGCGGGTGATCGCCGCCGCCCGCACGCATTTTGAGTTGCCGCCGGACGACGCGACGCTCAGCGTGGTCGAAGCCGACGGCGCGCTGTATGTGCGACAGCATCCCGGTAGCGCCGACGTCATCCTGCTCGACGGCTTCGACGCCGGCAATCAGGTCGAGGCGCTGGCGACGCAGACGTTTTATGCGGCCTGCCGCCGCGCGCTGAAGCCAAATGGCATGCTGGTGGTGAATCTGTGGGGGCGCGACAGCGAATTCGCCGAATATTTCGCGCGCCTGACGCGCGCGTTCGAGGGCGAGGTCGGCTGGCTTTCGGTGCAGAACAAAACCGCGGGCCAGCCGCAACGGGCCAATCTATCCAGACGCTGGGGGCTTGATCTGCGCGGTTTTGCGCGTGATTTTCAGTGGGCCGAGGGGATCGCGCCGTTGCTTGAATAG
PROTEIN sequence
Length: 240
MRLRLGKRRADDGGLEVTEERGLRVLRLGSRAIQSAMRVNRPWDLELAYTRAMMGFLMFNPLPQEVLMIGLGGGSLAKFIRKQRPQTRITAVEIDPRVIAAARTHFELPPDDATLSVVEADGALYVRQHPGSADVILLDGFDAGNQVEALATQTFYAACRRALKPNGMLVVNLWGRDSEFAEYFARLTRAFEGEVGWLSVQNKTAGQPQRANLSRRWGLDLRGFARDFQWAEGIAPLLE*