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SCNpilot_BF_INOC_scaffold_5285_13

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 12000..14084

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00037E3A8C similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 710.0
  • Bit_score: 1268
  • Evalue 0.0
RND efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 710.0
  • Bit_score: 1195
  • Evalue 0.0
RND efflux transporter similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 710.0
  • Bit_score: 1154
  • Evalue 0.0

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2085
ATGAATCTGTCGCGGCTCTTCATCGAGCGCCCGGTCGCCACGCTGATGCTGGTGCTGGCGATGGCGCCAGCTGGGGCGCTTGCCTACAAGTGTTCGCCGGTGAACGACCTGCCGCAGGTGGATTTCCCGACGCTGCGCATCACCGCGTCGCTGCCCGGCGCCAATCCCGAGACCATGGCCAACACCGTGGCGACGCCGCTGGAACGGCAATTGGCGACCGTGGCGGGGATCGAGTCGATGAGCTCGCAATCGGGCCAGGGCTCGACCAGCATCACGCTGCAGTTCGAACTCGGGCGCGACATCGATGCGGCCGCGCAGGACGTGCAGACCGCGATCGCGCAGGCGGCACGCAACCTGCCGCAGGGTATGGACCCGCCCCAGCTGAGGAAGATCAACCCGGCTGATTCGCCCATCATGTATCTGGCCCTGTCGGCCGAACGCCTGCCTTTGACCGAACTCGACGCCATCGCCGATTCGCGCGTGGCGCAAAAGCTGTCCAGCCTGTCCGGCGTGGCGCAGGTGCTGGTGTTCGGCTCGCAGAAATATGCGCTGCGCCTCTATCTCGACCCCGCCAAGCTGCAGCAGCGCGGACTGACTTTTGCCGACGTGATCCAGGCGGTACAGAATGCCAACGCCAACCTGCCGTCCGGCACGCTCGACGGCGCCAGTCGCGCCTATACGGTGAAGGCGCCGGTGGCGCTGGCCAATGCCGCGGACTTCGGCGACATCATCGTCGCCTATCACGACGGTACCGCGCTGCGGGTGAAAGACCTCGGCCGGGCCGAGGATGGCGTCGAGGACGACAAGCGCAAGACCTGGTACAACGGCACTCGCGCCATCGTGCTGGCAGTGCAGCGCCAGCCGGGGGCGAACACGGTCGCGGTCGCCGACCGCATTCGCGCGATGCTGCCGCAGATCGAGGCGGAACTGCCCGACGGCGTTCGCCTGCAGGTGCATTTCGATCGCTCGCGTTTCGTCAAGGATTCGCTGCACGAGGTGAATTTCACGCTGCTGCTCGCATTGGGACTGGTGATCCTCGTCATCTTCGCCTTCCTGCACAATGTCCGCGCCACGCTGATCGCCGCGCTGGTGCTGCCCAGTTCGCTGCTGGGCACCTTCGCCTTCATCACGCTGGCGATCGGTTTCGTGGTCGACGACGCGGTCGTGGTCATCGAGAACATCGCGCGCCACCTGGAAATGGGCAAGTCGCGCATGCAGGCCGCGCTCGACGGGGCGCAGGAGATCGGCTTCACCGTGCTGTCGATGACCATCTCGCTCGCCGCCGTCTTTCTGCCCATTCTCTTCATGGGCGGCATGATCGGGCGGCTATTCCAGGAATTCGCGGTGAGCATCGGCATCGCCGTGCTGCTCTCCGGCGTGGTGGCGCTGACGCTCACGCCGATGCTGTGCGCGCGCGGGCTGGTCAACGAACCGCTCGACAATCGCCTGTCGCGCCTGTTCGATTCGGGTTTCAATCGCTTCCGCGATTTTTACGGCGACACCCTGCGCGCGTCGATGCGTCACCGGGGGAGCATGCTGTTGTTCTCGGTGGTCGTGCTCGCCGCAATGCTGTGGCTGGCCGGCCACGTCAAGCAGGGATTCATTCCTCGCGTCGACTCCGGGATGATCTTCGCCAGCGTGCAGTATCCGGAAGGCATTCCGTTCGACGAGCTGAGCAAGCGCCAGGAGGCACTCGCCGCCCTCGTGCAGAAGCACCCGGCGGTCGAAGGCCTGATGTCGAGCGCCGGCCAGGGCGGCGGCGGGGTGACCGGCGGCAACATCGGGCGCCTGGTGATACGCCTGACGCCGCGCGGGACACGCAAGAGCGCAGACGAGGTGATCGACGAACTGCGCGCGATCACGCGCAAGGTCAGCGGCGTCAACGTCACCCTGCAGAATCCGGCATCGATCAACGTGGGCGCGCTGGCCTCCAGCAGCGATTACCAGTTGACCCTCATTTCGGGCGATTTCGAAGCGCTGAAAACGACGTCGGCCGAGGTCGAGAAGCGGCTTGAAGCGCTGCCCCAGATCGAGGACGTCGACAGCAATCTCGAACTGCGCAATCCCGAATTGCGCGTCACGCTC
PROTEIN sequence
Length: 695
MNLSRLFIERPVATLMLVLAMAPAGALAYKCSPVNDLPQVDFPTLRITASLPGANPETMANTVATPLERQLATVAGIESMSSQSGQGSTSITLQFELGRDIDAAAQDVQTAIAQAARNLPQGMDPPQLRKINPADSPIMYLALSAERLPLTELDAIADSRVAQKLSSLSGVAQVLVFGSQKYALRLYLDPAKLQQRGLTFADVIQAVQNANANLPSGTLDGASRAYTVKAPVALANAADFGDIIVAYHDGTALRVKDLGRAEDGVEDDKRKTWYNGTRAIVLAVQRQPGANTVAVADRIRAMLPQIEAELPDGVRLQVHFDRSRFVKDSLHEVNFTLLLALGLVILVIFAFLHNVRATLIAALVLPSSLLGTFAFITLAIGFVVDDAVVVIENIARHLEMGKSRMQAALDGAQEIGFTVLSMTISLAAVFLPILFMGGMIGRLFQEFAVSIGIAVLLSGVVALTLTPMLCARGLVNEPLDNRLSRLFDSGFNRFRDFYGDTLRASMRHRGSMLLFSVVVLAAMLWLAGHVKQGFIPRVDSGMIFASVQYPEGIPFDELSKRQEALAALVQKHPAVEGLMSSAGQGGGGVTGGNIGRLVIRLTPRGTRKSADEVIDELRAITRKVSGVNVTLQNPASINVGALASSSDYQLTLISGDFEALKTTSAEVEKRLEALPQIEDVDSNLELRNPELRVTL