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SCNpilot_BF_INOC_scaffold_6138_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(2..256)

Top 3 Functional Annotations

Value Algorithm Source
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12493479 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 85.0
  • Bit_score: 180
  • Evalue 9.90e-43
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 85.0
  • Bit_score: 171
  • Evalue 3.80e-40
sigma-24 (FecI) similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 85.0
  • Bit_score: 148
  • Evalue 1.20e-33

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGCTCAGCCGCCTTCTTTTTGGCCCGTCTCGCCCAGGTATCGAAGCCTTGCGCCCGCTGCTCTACCGGATCGCCTTCGCCTGGTGCCATGATGCCGCGCTGGCGGACGATCTGGTTCAGGAAGCGCTCTCCAAGGGGTGGAAGCGGCGCGCCCAGTTGCGCGACGAGGCCGCGCTGAAGGCATGGATGGTATCGATCATGAACCACTGCTGGCTCGATCACTTGCGCAGCCGGCGCGACTTCGACGACATCGAG
PROTEIN sequence
Length: 85
MLSRLLFGPSRPGIEALRPLLYRIAFAWCHDAALADDLVQEALSKGWKRRAQLRDEAALKAWMVSIMNHCWLDHLRSRRDFDDIE