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SCNpilot_BF_INOC_scaffold_7920_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(3..224)

Top 3 Functional Annotations

Value Algorithm Source
lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] id=12494555 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 74.0
  • Bit_score: 135
  • Evalue 2.40e-29
lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 74.0
  • Bit_score: 128
  • Evalue 5.50e-27
lipid A export ATP-binding/permease MsbA similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 62.0
  • Bit_score: 117
  • Evalue 1.90e-24

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGACGCCCGCTCCCGACTCCCCTGAAGGGCACAAGAGTCGCGCGCTCTATGGCCGCCTGCTCGGCTATGTCAAGCCGTATTGGCGCATGTTCGCGCTGTCCCTCGTCGCGCTGGTCCTCACCGCCGCCACCGAGCCGGTGCTGCCTGCCTTGTTCAAGCCGCTGCTGGACAAGGGCTTCGTCGCCAAGGACCAGGATTTCATCCGCTGGATTCCGATCCTG
PROTEIN sequence
Length: 74
MTPAPDSPEGHKSRALYGRLLGYVKPYWRMFALSLVALVLTAATEPVLPALFKPLLDKGFVAKDQDFIRWIPIL