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SCNpilot_BF_INOC_scaffold_7920_6

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(4396..4608)

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 69.0
  • Bit_score: 139
  • Evalue 2.30e-30
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 69.0
  • Bit_score: 119
  • Evalue 3.70e-25
shikimate 5-dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003661DB0 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 69.0
  • Bit_score: 139
  • Evalue 1.20e-30

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
CCGCTGTCGCCGCGCGTGTTCACCCCGGACACGATGGCCTACGACATGATGTACGGGCGCGACACGCCCTTCCTCGACTTCGCCCGCACGCACGGCGCGCGCACCGCCGATGGCCTCGGCATGCTGGTGGAGCAGGCGGCCGAAGCGTTCCATCTGTGGCGCGGCGTGCGCCCCGACACCGCCCCCATCATCGTGGCCCTGCGCACAGCATGA
PROTEIN sequence
Length: 71
PLSPRVFTPDTMAYDMMYGRDTPFLDFARTHGARTADGLGMLVEQAAEAFHLWRGVRPDTAPIIVALRTA*