ggKbase home page

SCNpilot_BF_INOC_scaffold_8247_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_45

near complete RP 48 / 55 MC: 3 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(3..281)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=12493505 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 93.0
  • Bit_score: 186
  • Evalue 1.50e-44
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 93.0
  • Bit_score: 166
  • Evalue 2.30e-38
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 81.0
  • Bit_score: 153
  • Evalue 2.40e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGCCGTTCTTCTCCCCCTCCTCCCCGCCTTCCGGCCACCGCCAGTCCGGCCTCGCCGGCGCGGCCGATGCGTTGTATCTGGCCGAACTGGCGCGCCATGCCGCGCCGCTGGCGGTGGTATGCGCGAGTGCGTGGGACGCCAACCGGCTGGCCGAGGAGCTGCGCTGGTTCGACCCGGCATTGCGGGTATGCGCCTTCCCCGACTGGGAAACCCTGCCCTACGACACCTTCTCGCCGCACCCGGACCTGATTTCCGAGCGGCTGGCGACGCTGTACCAG
PROTEIN sequence
Length: 93
MPFFSPSSPPSGHRQSGLAGAADALYLAELARHAAPLAVVCASAWDANRLAEELRWFDPALRVCAFPDWETLPYDTFSPHPDLISERLATLYQ