ggKbase home page

SCNpilot_BF_INOC_scaffold_101

Search features with annotation key words

Displaying items 181-210 of 426 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_101_181
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180930..181193
DNA (264bp) protein (88aa)
glutaredoxin, GrxC; K03676 glutaredoxin 3 id=12496499 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glutaredoxin, GrxC
Glutaredoxin, GrxC {ECO:0000313|EMBL:AAZ98353.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitr
SCNpilot_BF_INOC_scaffold_101_182
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181319..181747
DNA (429bp) protein (143aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8] id=12496498 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8] Tax=GWE1_Thiobacillus_62_9_curated
thioredoxin
SCNpilot_BF_INOC_scaffold_101_183
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181846..182301
DNA (456bp) protein (152aa)
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB id=12496497 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
preprotein translocase subunit SecB
SCNpilot_BF_INOC_scaffold_101_184
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182298..182741
DNA (444bp) protein (148aa)
hypothetical protein id=12496496 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_101_185
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182738..183724
DNA (987bp) protein (329aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] id=12496495 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWE1_Thiobacillus_62_9_curated
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
SCNpilot_BF_INOC_scaffold_101_186
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183935..187015
DNA (3081bp) protein (1027aa)
hypothetical protein id=12496494 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_101_187
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187019..187495)
DNA (477bp) protein (159aa)
hypothetical protein id=12496493 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_101_188
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187555..188019)
DNA (465bp) protein (155aa)
RNA methyltransferase CspR; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] id=12496492 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RNA methyltransferase CspR; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] Tax=GWE1_Thiobacillus_62_9_curated
RNA methyltransferase CspR
SCNpilot_BF_INOC_scaffold_101_189
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

188106..189413
DNA (1308bp) protein (436aa)
glutamate--cysteine ligase GshA; K01919 glutamate--cysteine ligase [EC:6.3.2.2] id=12496491 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glutamate--cysteine ligase GshA; K01919 glutamate--cysteine ligase [EC:6.3.2.2] Tax=GWE1_Thiobacillus_62_9_curated
glutamate--cysteine ligase GshA
SCNpilot_BF_INOC_scaffold_101_190
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189410..190342
DNA (933bp) protein (311aa)
glutathione synthase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3] id=12496490 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glutathione synthase (EC:6.3.2.3)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:
SCNpilot_BF_INOC_scaffold_101_191
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190342..191337
DNA (996bp) protein (332aa)
putative thaimine biosynthesis protein; K03734 thiamine biosynthesis lipoprotein id=12496489 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative thaimine biosynthesis protein; K03734 thiamine biosynthesis lipoprotein Tax=GWE1_Thiobacillus_62_9_curated
thaimine biosynthesis protein
SCNpilot_BF_INOC_scaffold_101_192
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191392..191808
DNA (417bp) protein (139aa)
pentitol phosphotransferase enzyme IIA component; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69] id=12496488 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pentitol phosphotransferase enzyme IIA component; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69] Tax=GWE1_Thiobacillus_62_9_curated
pentitol phosphotransferase enzyme IIA component
SCNpilot_BF_INOC_scaffold_101_193
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191789..192061
DNA (273bp) protein (91aa)
HPrNtr; K11189 phosphocarrier protein id=12496487 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
HPrNtr; K11189 phosphocarrier protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
HPrNtr
SCNpilot_BF_INOC_scaffold_101_194
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192066..193799
DNA (1734bp) protein (578aa)
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] id=12496486 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
SCNpilot_BF_INOC_scaffold_101_195
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193830..195734)
DNA (1905bp) protein (635aa)
hypothetical protein id=12496485 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_101_196
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195741..196052)
DNA (312bp) protein (104aa)
hypothetical protein; K09131 hypothetical protein id=12496484 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K09131 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_101_197
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196042..196617)
DNA (576bp) protein (192aa)
hypothetical protein; K02221 YggT family protein id=12496483 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K02221 YggT family protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_101_198
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196614..197429)
DNA (816bp) protein (272aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] id=12496482 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
SCNpilot_BF_INOC_scaffold_101_199
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197422..198171)
DNA (750bp) protein (250aa)
hypothetical protein; K06997 id=12496481 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K06997 Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_101_200
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198214..199257
DNA (1044bp) protein (348aa)
pilus retraction ATPase PilT; K02669 twitching motility protein PilT id=12496480 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pilus retraction ATPase PilT; K02669 twitching motility protein PilT Tax=GWE1_Thiobacillus_62_9_curated
pilus retraction ATPase PilT
SCNpilot_BF_INOC_scaffold_101_201
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

199298..200425
DNA (1128bp) protein (376aa)
pilus retraction protein PilT; K02670 twitching motility protein PilU id=12496479 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pilus retraction protein PilT
Pilus retraction protein PilT {ECO:0000313|EMBL:AAZ98373.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
SCNpilot_BF_INOC_scaffold_101_202
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201335..202585)
DNA (1251bp) protein (417aa)
N6-adenine-specific DNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=12496478 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
N-6 adenine-specific DNA methylase
N6-adenine-specific DNA methylase {ECO:0000313|EMBL:AAZ98377.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thio
SCNpilot_BF_INOC_scaffold_101_203
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202596..203009)
DNA (414bp) protein (138aa)
transmembrane protein; K08973 putative membrane protein id=12496477 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98378.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
SCNpilot_BF_INOC_scaffold_101_204
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203026..203544
DNA (519bp) protein (173aa)
alkyl hydroperoxide reductase id=12496476 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
alkyl hydroperoxide reductase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
alkyl hydroperoxide reductase
SCNpilot_BF_INOC_scaffold_101_205
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203541..203765
DNA (225bp) protein (75aa)
SlyX protein; K03745 SlyX protein id=12496475 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SlyX protein; K03745 SlyX protein Tax=GWE1_Thiobacillus_62_9_curated
SlyX protein
SCNpilot_BF_INOC_scaffold_101_206
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203801..205099)
DNA (1299bp) protein (433aa)
diguanylate cyclase id=12496474 bin=THIO_MID species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diguanylate cyclase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_101_207
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205173..206837)
DNA (1665bp) protein (555aa)
putative ABC transporter ATP-binding protein; K06020 sulfate-transporting ATPase [EC:3.6.3.25] id=12496473 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative ABC transporter ATP-binding protein; K06020 sulfate-transporting ATPase [EC:3.6.3.25] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_101_208
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207117..207629)
DNA (513bp) protein (171aa)
putative thioredoxin id=12496472 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative thioredoxin Tax=GWE1_Thiobacillus_62_9_curated
thioredoxin
SCNpilot_BF_INOC_scaffold_101_209
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207644..208192)
DNA (549bp) protein (183aa)
carbonic anhydrase id=12496471 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
carbonic anhydrase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
carbonic anhydrase
SCNpilot_BF_INOC_scaffold_101_210
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208257..210296
DNA (2040bp) protein (680aa)
oligopeptidase A (EC:3.4.24.70); K01414 oligopeptidase A [EC:3.4.24.70] id=12496470 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Oligopeptidase A {ECO:0000313|EMBL:AAZ98386.1}; EC=3.4.24.70 {ECO:0000313|EMBL:AAZ98386.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae;
oligopeptidase A (EC:3.4.24.70)
Displaying items 181-210 of 426 in total

View Taxonomy