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SCNpilot_BF_INOC_scaffold_136

Search features with annotation key words

Displaying items 571-589 of 589 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_136_571
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(579783..580664)
DNA (882bp) protein (294aa)
cbbR2; transcriptional regulator id=12496237 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbbR2; transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cbbR2; transcriptional regulator
SCNpilot_BF_INOC_scaffold_136_572
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

580791..582170
DNA (1380bp) protein (460aa)
ribulose bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=12496238 bin=THIO_MID species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribulose bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ribulose bisphosphate carboxylase (EC:4.1.1.39)
SCNpilot_BF_INOC_scaffold_136_573
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

582315..583121
DNA (807bp) protein (269aa)
cbbQ2; rubisco activation protein CbbQ; K04748 nitric oxide reductase NorQ protein id=12496239 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbbQ2; rubisco activation protein CbbQ
Rubisco activation protein CbbQ {ECO:0000313|EMBL:AAZ98590.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thioba
SCNpilot_BF_INOC_scaffold_136_574
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

583263..585524
DNA (2262bp) protein (754aa)
cbbO2; rubisco activation protein CbbO id=12496240 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbbO2; rubisco activation protein CbbO Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cbbO2; rubisco activation protein cbbO
SCNpilot_BF_INOC_scaffold_136_575
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(585531..585857)
DNA (327bp) protein (109aa)
hypothetical protein id=12496241 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_136_576
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(585861..586514)
DNA (654bp) protein (218aa)
glutathione S-transferase; K04097 glutathione S-transferase [EC:2.5.1.18] id=12496242 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
glutathione S-transferase domain-containing protein; K04097 glutathione S-transferase [EC:2.5.1.18] Tax=GWE1_Thiobacillus_62_9_curated
glutathione S-transferase
SCNpilot_BF_INOC_scaffold_136_577
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(586612..586908)
DNA (297bp) protein (99aa)
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta id=12496243 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
histone-like DNA-binding protein
Histone-like DNA-binding protein {ECO:0000313|EMBL:AAZ95960.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiob
SCNpilot_BF_INOC_scaffold_136_578
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

587304..588968
DNA (1665bp) protein (555aa)
NADH dehydrogenase (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=12496244 bin=THIO_MID species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
NADH dehydrogenase (EC:1.6.99.5)
NADH dehydrogenase, subunit 5 {ECO:0000313|EMBL:EXJ15177.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococc
SCNpilot_BF_INOC_scaffold_136_579
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

588971..589705
DNA (735bp) protein (245aa)
hypothetical protein id=12496245 bin=THIO_MID species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_136_580
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

589702..592800
DNA (3099bp) protein (1033aa)
hypothetical protein; K09822 hypothetical protein id=12496246 bin=THIO_MID species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
UPF0753 protein NB231_15223 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitroco
hypothetical protein
SCNpilot_BF_INOC_scaffold_136_581
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

592797..593123
DNA (327bp) protein (109aa)
nitrogen regulatory protein P-II id=12496247 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EXJ15180.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodoc
nitrogen regulatory protein P-II
SCNpilot_BF_INOC_scaffold_136_582
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(593113..594069)
DNA (957bp) protein (319aa)
LysR family transcriptional regulator id=12496248 bin=THIO_MID species=unknown genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO34745.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sul
transcriptional regulator
SCNpilot_BF_INOC_scaffold_136_583
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

594277..595698
DNA (1422bp) protein (474aa)
rbcL; Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (RuBisCO large subunit) (EC:4.1.1.39) id=12496249 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338, ECO:00003
SCNpilot_BF_INOC_scaffold_136_584
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

595811..596137
DNA (327bp) protein (109aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] id=12496250 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase/oxygenase small subunit {ECO:0000313|EMBL:AAD02446.1}; Ribulose-bisphosphate carboxylase {ECO:0000313|EMBL:ADG29529.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ADG29529.1};; Ta
SCNpilot_BF_INOC_scaffold_136_585
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

596267..598945
DNA (2679bp) protein (893aa)
carboxysome shell protein id=12496251 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
carboxysome shell protein
Carboxysome shell protein CsoS2 {ECO:0000313|EMBL:ADG29530.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12
SCNpilot_BF_INOC_scaffold_136_586
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

598991..600511
DNA (1521bp) protein (507aa)
carboxysome shell carbonic anhydrase id=12496252 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
carboxysome shell carbonic anhydrase
Carboxysome shell carbonic anhydrase {ECO:0000313|EMBL:ADG29531.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strai
SCNpilot_BF_INOC_scaffold_136_587
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

600522..600782
DNA (261bp) protein (87aa)
carboxysome peptide A id=12496253 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Carboxysome polypeptide
Carboxysome peptide A {ECO:0000313|EMBL:ADG29532.1}; Carboxysome polypeptide {ECO:0000313|EMBL:AAD02449.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomona
SCNpilot_BF_INOC_scaffold_136_588
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

600782..601027
DNA (246bp) protein (82aa)
microcompartments protein id=12496254 bin=THIO_MID species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:ABE64932.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburg
SCNpilot_BF_INOC_scaffold_136_589
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

601122..601241
DNA (120bp) protein (40aa)
microcompartments protein id=12496255 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
microcompartments protein
Carboxysome structural polypeptide {ECO:0000313|EMBL:AAD02451.1}; CsoS1C {ECO:0000313|EMBL:AAC24754.1}; Microcompartments protein {ECO:0000313|EMBL:ADG29534.1}; TaxID=75379 species="Bacteria; Proteoba
Displaying items 571-589 of 589 in total

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