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SCNpilot_BF_INOC_scaffold_185

Search features with annotation key words

Displaying items 31-60 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_185_31
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23054..23770)
DNA (717bp) protein (239aa)
flagellin domain-containing protein; K02406 flagellin id=12497544 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
flagellin domain-containing protein; K02406 flagellin Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
flagellin domain-containing protein
SCNpilot_BF_INOC_scaffold_185_32
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23918..25495)
DNA (1578bp) protein (526aa)
diguanylate cyclase id=12497545 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diguanylate cyclase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_185_33
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25699..26346)
DNA (648bp) protein (216aa)
two component LuxR family transcriptional regulator; K07689 two-component system, NarL family, invasion response regulator UvrY id=12497546 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
two component LuxR family transcriptional regulator; K07689 two-component system, NarL family, invasion response regulator UvrY Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
LuxR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_185_34
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26384..27832)
DNA (1449bp) protein (483aa)
sensor protein id=12497547 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sensor protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sensor protein
SCNpilot_BF_INOC_scaffold_185_35
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28072..28431
DNA (360bp) protein (120aa)
hypothetical protein id=12497548 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35944.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
SCNpilot_BF_INOC_scaffold_185_36
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28428..29168
DNA (741bp) protein (247aa)
RES domain-containing protein id=12497549 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RES domain-containing protein
RES domain-containing protein {ECO:0000313|EMBL:BAN35945.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricell
SCNpilot_BF_INOC_scaffold_185_37
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29211..29603
DNA (393bp) protein (131aa)
putative hydrolase id=12497550 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative hydrolase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hydrolase
SCNpilot_BF_INOC_scaffold_185_38
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29834..30562)
DNA (729bp) protein (243aa)
Uncharacterized protein id=12497551 bin=THIO_MID species=Thauera sp. 27 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFB73164.1}; Flags: Precursor;; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulib
SCNpilot_BF_INOC_scaffold_185_39
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31179..31424
DNA (246bp) protein (82aa)
id=12497552 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497552 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_185_40
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31417..31707
DNA (291bp) protein (97aa)
id=12497553 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497553 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_185_41
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31781..34300)
DNA (2520bp) protein (840aa)
lambda family phage tail tape measure protein id=12497554 bin=THIO_MID species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
lambda family phage tail tape measure protein
Phage tail tape measure protein, lambda family {ECO:0000313|EMBL:ABX36715.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="De
SCNpilot_BF_INOC_scaffold_185_42
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34454..36412)
DNA (1959bp) protein (653aa)
peptidase S14, ClpP id=12497555 bin=THIO_MID species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
peptidase S14, ClpP Tax=RBG_16_Gallionellales_56_9_curated
peptidase S14, ClpP
SCNpilot_BF_INOC_scaffold_185_43
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36491..36769)
DNA (279bp) protein (93aa)
id=12497556 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497556 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_185_44
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36831..37463)
DNA (633bp) protein (211aa)
hypothetical protein id=12497557 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RBG_16_Gallionellales_57_15_curated
SCNpilot_BF_INOC_scaffold_185_45
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37664..39325)
DNA (1662bp) protein (554aa)
hypothetical protein id=12497558 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFB73904.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_185_46
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39322..39516)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368EC61
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_185_47
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39735..39935)
DNA (201bp) protein (67aa)
hypothetical protein id=12497559 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein id=12497559 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_185_48
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39932..40168)
DNA (237bp) protein (79aa)
id=12497560 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497560 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_185_49
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40697..41653)
DNA (957bp) protein (319aa)
hypothetical protein id=12497561 bin=THIO_MID species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93510.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
SCNpilot_BF_INOC_scaffold_185_50
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41855..43087)
DNA (1233bp) protein (411aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=GWE1_Thiobacillus_62_9_curated
DNA-directed DNA polymerase id=12497562 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DNA-directed DNA polymerase
SCNpilot_BF_INOC_scaffold_185_51
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43163..44440)
DNA (1278bp) protein (426aa)
cyclic nucleotide-binding domain-containing protein; K07058 membrane protein id=12497563 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cyclic nucleotide-binding domain-containing protein; K07058 membrane protein Tax=GWE1_Thiobacillus_62_9_curated
cyclic nucleotide-binding protein
SCNpilot_BF_INOC_scaffold_185_52
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44496..45689)
DNA (1194bp) protein (398aa)
aminotransferase (EC:2.6.1.-); K00812 aspartate aminotransferase [EC:2.6.1.1] id=12497564 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
aminotransferase (EC:2.6.1.-); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
aminotransferase (EC:2.6.1.-)
SCNpilot_BF_INOC_scaffold_185_53
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45765..47792
DNA (2028bp) protein (676aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B id=12497565 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=GWE1_Thiobacillus_62_9_curated
excinuclease ABC subunit B
SCNpilot_BF_INOC_scaffold_185_54
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47808..48116)
DNA (309bp) protein (103aa)
hypothetical protein; K09984 hypothetical protein id=12497566 bin=THIO_MID species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYS86456.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-
SCNpilot_BF_INOC_scaffold_185_55
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48347..48772
DNA (426bp) protein (142aa)
hypothetical protein id=12497567 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_185_56
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48916..49404
DNA (489bp) protein (163aa)
protein tyrosine phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] id=12497568 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
protein tyrosine phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=GWE1_Thiobacillus_62_9_curated
protein tyrosine phosphatase (EC:3.1.3.48)
SCNpilot_BF_INOC_scaffold_185_57
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49475..52039)
DNA (2565bp) protein (855aa)
RNAse E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] id=12497569 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=292415 species="Bacteria; Proteobacteria; Bet
RNAse E (EC:3.1.4.-)
SCNpilot_BF_INOC_scaffold_185_58
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52441..53466
DNA (1026bp) protein (342aa)
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] id=12497570 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenoph
SCNpilot_BF_INOC_scaffold_185_59
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53450..54106
DNA (657bp) protein (219aa)
putative hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] id=12497571 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hydrolase
SCNpilot_BF_INOC_scaffold_185_60
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54085..54435
DNA (351bp) protein (117aa)
hypothetical protein id=12497572 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
Displaying items 31-60 of 142 in total

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