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SCNpilot_BF_INOC_scaffold_263

Search features with annotation key words

Displaying items 121-150 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_263_121
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118321..119739)
DNA (1419bp) protein (473aa)
Na+/H+ - glutamate/aspartate symport protein; K03309 dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family id=12498105 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Na+/H+ - glutamate/aspartate symport protein
Na+/H+ - glutamate/aspartate symport protein; K03309 dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_263_122
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119800..121170
DNA (1371bp) protein (457aa)
hypothetical protein id=12498106 bin=THIO_MID species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Putative kamA3 {ECO:0000313|EMBL:KIN91030.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
SCNpilot_BF_INOC_scaffold_263_123
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121308..122510
DNA (1203bp) protein (401aa)
serine-type D-ala-D-ala-carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] id=12498107 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
serine-type D-ala-D-ala-carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=GWE1_Thiobacillus_62_9_curated
serine-type D-ala-D-ala-carboxypeptidase (EC:3.4.16.4)
SCNpilot_BF_INOC_scaffold_263_124
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122612..123331
DNA (720bp) protein (240aa)
id=12498108 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12498108 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_263_125
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123477..124883
DNA (1407bp) protein (469aa)
hypothetical protein id=12498109 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_263_126
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124911..125714)
DNA (804bp) protein (268aa)
hypothetical protein id=12498110 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_263_127
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(126876..127877)
DNA (1002bp) protein (334aa)
hypothetical protein id=12498186 bin=THIO_MID species=Psychrobacter sp. PAMC 21119 genus=Psychrobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Predicted protein {ECO:0000313|EMBL:EEU71226.1}; TaxID=565646 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis HIP11704.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_263_128
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128218..131178)
DNA (2961bp) protein (987aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=12498117 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component {ECO:0000313|EMBL:AAZ96605.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenoph
SCNpilot_BF_INOC_scaffold_263_129
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131251..132234)
DNA (984bp) protein (328aa)
pyruvate dehydrogenase E1 subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] id=12498118 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pyruvate dehydrogenase E1 subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=GWE1_Thiobacillus_62_9_curated
pyruvate dehydrogenase E1 subunit beta
SCNpilot_BF_INOC_scaffold_263_130
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132253..133254)
DNA (1002bp) protein (334aa)
dehydrogenase complex, E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=12498119 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
dehydrogenase complex, E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=GWE1_Thiobacillus_62_9_curated
dehydrogenase complex, E1 component subunit alpha
SCNpilot_BF_INOC_scaffold_263_131
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133385..134842
DNA (1458bp) protein (486aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] id=12498120 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
leucyl aminopeptidase (EC:3.4.11.1)
SCNpilot_BF_INOC_scaffold_263_132
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134839..135480
DNA (642bp) protein (214aa)
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] id=12498121 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-)
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:AAZ96611.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.
SCNpilot_BF_INOC_scaffold_263_133
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135485..135985)
DNA (501bp) protein (167aa)
hypothetical protein id=12498122 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96614.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
SCNpilot_BF_INOC_scaffold_263_134
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136144..136593
DNA (450bp) protein (150aa)
id=12498123 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12498123 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_263_135
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136628..137182)
DNA (555bp) protein (185aa)
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] id=12498124 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=GWE1_Thiobacillus_62_9_curated
GTP cyclohydrolase I (EC:3.5.4.16)
SCNpilot_BF_INOC_scaffold_263_136
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137280..137927)
DNA (648bp) protein (216aa)
SnoaL-like polyketide cyclase id=12498125 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=THIO_MID organism_group=Betaproteobacteria
SnoaL-like polyketide cyclase Tax=GWE1_Thiobacillus_62_9_curated
SnoaL-like polyketide cyclase
SCNpilot_BF_INOC_scaffold_263_137
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138080..139483
DNA (1404bp) protein (468aa)
GntR family transcriptional regulator id=12498126 bin=THIO_MID species=Cellvibrio japonicus genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
GntR family transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
GntR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_263_138
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139491..141203)
DNA (1713bp) protein (571aa)
acetolactate synthase, large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=12498127 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase large subunit {ECO:0000313|EMBL:AAZ96615.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Th
SCNpilot_BF_INOC_scaffold_263_139
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141584..142171)
DNA (588bp) protein (196aa)
hypothetical protein id=12498128 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_263_140
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142329..143408)
DNA (1080bp) protein (360aa)
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] id=12498129 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] Tax=GWE1_Thiobacillus_62_9_curated
transaldolase (EC:2.2.1.2)
SCNpilot_BF_INOC_scaffold_263_141
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143549..144646
DNA (1098bp) protein (366aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] id=12498130 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:
SCNpilot_BF_INOC_scaffold_263_142
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144655..145605)
DNA (951bp) protein (317aa)
hypothetical protein id=12498131 bin=THIO_MID species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KIF81309.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
hypothetical protein
SCNpilot_BF_INOC_scaffold_263_143
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145786..147282
DNA (1497bp) protein (499aa)
phospholipase D/transphosphatidylase id=12498132 bin=THIO_MID species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phospholipase D/transphosphatidylase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
phospholipase D/transphosphatidylase
SCNpilot_BF_INOC_scaffold_263_144
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147303..149027
DNA (1725bp) protein (575aa)
putative adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] id=12498133 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
adenylate/guanylate cyclase
SCNpilot_BF_INOC_scaffold_263_145
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149926..150234)
DNA (309bp) protein (103aa)
plasmid maintenance system antidote protein id=12498134 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
plasmid maintenance system antidote protein
Possible Plasmid maintenance system antidote protein {ECO:0000313|EMBL:AAZ96625.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacil
SCNpilot_BF_INOC_scaffold_263_146
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150247..150525)
DNA (279bp) protein (93aa)
plasmid maintenance system killer protein; K07334 proteic killer suppression protein id=12498135 bin=THIO_MID species=Oxalobacter formigenes genus=Oxalobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Excinuclease ABC subunit A {ECO:0000313|EMBL:GAO34634.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella s
toxin, RelE family
SCNpilot_BF_INOC_scaffold_263_147
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150612..150884)
DNA (273bp) protein (91aa)
hypothetical protein id=12498136 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_263_148
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150973..152139)
DNA (1167bp) protein (389aa)
major facilitator superfamily protein id=12498137 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
major facilitator superfamily protein Tax=GWE1_Thiobacillus_62_9_curated
major facilitator superfamily protein
SCNpilot_BF_INOC_scaffold_263_149
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152254..152736
DNA (483bp) protein (161aa)
YbaK-like protein id=12498138 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
YbaK-like protein Tax=GWE1_Thiobacillus_62_9_curated
prolyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_263_150
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152895..153422
DNA (528bp) protein (176aa)
putative aspartyl protease; K06985 aspartyl protease family protein id=12498139 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative aspartyl protease; K06985 aspartyl protease family protein Tax=GWE1_Thiobacillus_62_9_curated
aspartyl protease
Displaying items 121-150 of 192 in total

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