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SCNpilot_BF_INOC_scaffold_287

Search features with annotation key words

Displaying items 61-90 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_287_61
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57295..57888)
DNA (594bp) protein (198aa)
recR; recombination protein RecR; K06187 recombination protein RecR id=12497771 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
recR; recombination protein RecR
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
SCNpilot_BF_INOC_scaffold_287_62
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57905..58231)
DNA (327bp) protein (109aa)
hypothetical protein; K09747 hypothetical protein id=12497772 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Nucleoid-associated protein Tbd_0516 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sourc
SCNpilot_BF_INOC_scaffold_287_63
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58228..60000)
DNA (1773bp) protein (591aa)
DNA polymerase subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] id=12497773 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
DNA polymerase subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA polymerase subunits gamma and tau (EC:2.7.7.7)
SCNpilot_BF_INOC_scaffold_287_64
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60280..61356)
DNA (1077bp) protein (359aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] id=12497774 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=GWE1_Thiobacillus_62_9_curated
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
SCNpilot_BF_INOC_scaffold_287_65
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61638..65303
DNA (3666bp) protein (1222aa)
diguanylate cyclase/phosphodiesterase id=12497775 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
signal transduction protein Tax=GWE1_Thiobacillus_62_9_curated
diguanylate cyclase/phosphodiesterase
SCNpilot_BF_INOC_scaffold_287_66
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65551..66387)
DNA (837bp) protein (279aa)
Mrr restriction endonuclease; K07448 restriction system protein id=12497776 bin=THIO_MID species=Brevibacillus brevis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=THIO_MID organism_group=Betaproteobacteria
Restriction endonuclease {ECO:0000313|EMBL:GAO36290.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
Mrr restriction system protein
SCNpilot_BF_INOC_scaffold_287_67
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66396..66608)
DNA (213bp) protein (71aa)
putative modulator of DNA gyrase; K03568 TldD protein id=12493791 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tldD; putative peptidase
peptidase U62 modulator of DNA gyrase; K03568 TldD protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_287_68
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67003..67308
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A729F
hypothetical protein Tax=GWA2_Rhodocyclales_65_20_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_287_69
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67838..68782)
DNA (945bp) protein (315aa)
carbon-nitrogen hydrolase; K01501 nitrilase [EC:3.5.5.1] id=12497778 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
carbon-nitrogen hydrolase; K01501 nitrilase [EC:3.5.5.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
carbon-nitrogen hydrolase
SCNpilot_BF_INOC_scaffold_287_70
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68798..72628)
DNA (3831bp) protein (1277aa)
hypothetical protein id=12497779 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:AAZ96463.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
hypothetical protein
SCNpilot_BF_INOC_scaffold_287_71
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72660..73052)
DNA (393bp) protein (131aa)
RNA-binding S4 protein; K04762 ribosome-associated heat shock protein Hsp15 id=12497780 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RNA-binding S4 protein; K04762 ribosome-associated heat shock protein Hsp15 Tax=GWE1_Thiobacillus_62_9_curated
RNA-binding S4 protein
SCNpilot_BF_INOC_scaffold_287_72
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73042..73947)
DNA (906bp) protein (302aa)
LysR family transcriptional regulator id=12497781 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_287_73
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74048..74749
DNA (702bp) protein (234aa)
Pirin domain-containing protein id=12497782 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Pirin domain-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Pirin domain-containing protein
SCNpilot_BF_INOC_scaffold_287_74
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74776..75354
DNA (579bp) protein (193aa)
hypothetical protein id=12497783 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_287_75
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75362..75538)
DNA (177bp) protein (59aa)
hypothetical protein id=12497784 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_BF_INOC_scaffold_287_76
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75746..76135)
DNA (390bp) protein (130aa)
putative Translational machinery protein id=12497785 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
putative Translational machinery protein
SCNpilot_BF_INOC_scaffold_287_77
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76219..78183)
DNA (1965bp) protein (655aa)
acetyl-CoA synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] id=12497786 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
acetyl-CoA synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=GWE1_Thiobacillus_62_9_curated
acetyl-CoA synthetase (EC:6.2.1.1)
SCNpilot_BF_INOC_scaffold_287_78
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78237..80909
DNA (2673bp) protein (891aa)
putative glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] id=12497787 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=GWE1_Thiobacillus_62_9_curated
glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42)
SCNpilot_BF_INOC_scaffold_287_79
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80918..81466)
DNA (549bp) protein (183aa)
hypothetical protein id=12497788 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_287_80
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81693..84395
DNA (2703bp) protein (901aa)
pma1; putative cation-transporting P-type ATPase (EC:3.6.3.-); K01552 [EC:3.6.3.-] id=12497789 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pma1; putative cation-transporting P-type ATPase (EC:3.6.3.-); K01552 [EC:3.6.3.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
pma1; putative cation-transporting P-type ATPase (EC:3.6.3.-)
SCNpilot_BF_INOC_scaffold_287_81
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84537..85439
DNA (903bp) protein (301aa)
UspA domain-containing protein id=12497790 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
uspA; universal stress protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
UspA domain-containing protein
SCNpilot_BF_INOC_scaffold_287_82
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85500..85973
DNA (474bp) protein (158aa)
MarR family transcriptional regulator id=12497791 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
MarR family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
MarR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_287_83
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85986..86888)
DNA (903bp) protein (301aa)
mechanosensitive ion channel; K03442 small conductance mechanosensitive channel id=12497792 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
mechanosensitive ion channel; K03442 small conductance mechanosensitive channel Tax=GWE1_Thiobacillus_62_9_curated
mechanosensitive ion channel MscS
SCNpilot_BF_INOC_scaffold_287_84
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86978..87898)
DNA (921bp) protein (307aa)
PfkB; K00847 fructokinase [EC:2.7.1.4] id=12497793 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
PfkB
PfkB {ECO:0000313|EMBL:ABB75560.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain AT
SCNpilot_BF_INOC_scaffold_287_85
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87910..88935)
DNA (1026bp) protein (342aa)
hypothetical protein id=12497794 bin=THIO_MID species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EDM84284.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED
hypothetical protein
SCNpilot_BF_INOC_scaffold_287_86
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89151..90230
DNA (1080bp) protein (360aa)
thioredoxin-like protein id=12497795 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
thioredoxin-like protein Tax=GWE1_Thiobacillus_62_9_curated
thioredoxin
SCNpilot_BF_INOC_scaffold_287_87
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90404..94345
DNA (3942bp) protein (1314aa)
signal transduction protein containing a membrane domain an EAL and a GGDEF domain id=12497796 bin=THIO_MID species=Thioalkalivibrio thiocyanodenitrificans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
signal transduction protein containing a membrane domain an EAL and a GGDEF domain
Signal transduction protein containing a membrane domain an EAL and a GGDEF domain {ECO:0000313|EMBL:ACL71344.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ect
SCNpilot_BF_INOC_scaffold_287_88
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94434..97226
DNA (2793bp) protein (931aa)
putative monovalent cation/H+ antiporter subunit A (EC:1.6.99.5); K05559 multicomponent K+:H+ antiporter subunit A id=12497797 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative monovalent cation/H+ antiporter subunit A (EC:1.6.99.5); K05559 multicomponent K+:H+ antiporter subunit A Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
monovalent cation/H+ antiporter subunit A (EC:1.6.99.5)
SCNpilot_BF_INOC_scaffold_287_89
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97226..97570
DNA (345bp) protein (115aa)
putative monovalent cation/H+ antiporter subunit C; K05560 multicomponent K+:H+ antiporter subunit C id=12497798 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
monovalent cation/H+ antiporter subunit C
Multicomponent K+:H+ antiporter subunit C {ECO:0000313|EMBL:AAZ96449.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sour
SCNpilot_BF_INOC_scaffold_287_90
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97567..99081
DNA (1515bp) protein (505aa)
putative monovalent cation/H+ antiporter subunit D (EC:1.6.99.5); K05561 multicomponent K+:H+ antiporter subunit D id=12497799 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative monovalent cation/H+ antiporter subunit D (EC:1.6.99.5); K05561 multicomponent K+:H+ antiporter subunit D Tax=GWE1_Thiobacillus_62_9_curated
monovalent cation/H+ antiporter subunit D (EC:1.6.99.5)
Displaying items 61-90 of 114 in total

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