ggKbase home page

SCNpilot_BF_INOC_scaffold_101_299

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 299888..301561

Top 3 Functional Annotations

Value Algorithm Source
lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] id=12496381 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 558.0
  • Bit_score: 1077
  • Evalue 0.0
Lipid A export ATP-binding/permease protein MsbA {ECO:0000255|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01703};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; H similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 556.0
  • Bit_score: 939
  • Evalue 2.00e-270
lipid A export ATP-binding/permease MsbA similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 556.0
  • Bit_score: 939
  • Evalue 4.00e-271

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1674
ATGTTCGCCCTGTCCATCGTCGGCCTGGTCCTGACCGCCGCCACCGAGCCGCTGCTGCCGGCATTGTTCAAGCCGCTGCTGGACGAAGGCTTCGTCGGCAAGAACGAGGCATTCATGCGCTGGGTGCCGGTACTGCTGCTGGCCCTGTTCCTCGTGCGTGGCGTCACCAGTTTCGTCAGCACCTACTGCATGGCCTGGGTGGGCAGCCGTCTCGTCATGGATCTGCGCGCGGCGATGTTCGGCAAGCTGATGACGCTACCGACCCGCTATTTCGACCAGAATCCGAGCGGTCAGCTGATCGCCCACCTGGCCTTCAACGTCACCCAGGTCACGCAGTCCGCCACATCCGCCGTCACCACGCTGGTGCGCGATTCGCTCACGGTAGCCGGGCTGCTGGGCTATCTGCTGTGGCTGAACTGGAAGCTCACCGCCGTCGTGTTCGGCATGGCGCCGCTCACCCTGTGGGTGGTGCGCGTGGCGAGCAAGCGCCTGCGCGGCCTGTCGCGCAAGGCCCAGCAGAACATCGGCGAGCTCACGCAGGTGGTGGACGAGGCCGTCGACGGCCATCGCGTGGTCAAGCTCTACGGCGGCGAGACCTACGAGCAGGGCCGTTTCCTGCATGCCGCCAACCAGGCGCGCCTGTTCGAGATGAAGCGCGTCGCCGCCAACGCGATCTACGAACCGTTCGTGCAGTTCCTCGCCGCGGTGGCGCTTGCCATCATCGTCTACATCGCCGCGGACCAGGCCAGCGAGGACGCCACCACGGTCGGCGGTTTCGTCGCCTTCTTCATGGCCATGCTGCTGCTGTTCGCGCCGCTCAAGCGGTTGACCGCAGTCAACGACCAGATGCAGCGCGGCCTGGCCGCCTCCGAAACCATCTTCGCCCTGCTCGACCAGGACGCCGAACGCGATACCGGCACGCGCACGCCCGAACGCATCGAAGGCCGGCTCCGTTTCCGCGATGTCACGCTCACCTATCCGGGCAAGGACGTGCCCGCGCTGGATCGCATCAGCCTCGACATCGCGCCGGGCGAAACCGTCGCGCTGGTCGGCGCGTCCGGCTCGGGCAAGACCACACTGGCCAATCTGGTGCCGCGCTTCTACGACCCGGACAGCGGGCAGATCGAACTCGACGACCTGGACACCCGCGACATTGCCCTGCAGACCCTGCGCAGCCACATTGCCCTGGTCTCGCAGGACGTGGTGCTGTTCAACGACACGCTGGCGCACAACATTGCCTACGGCAGCAAACGCGACGCCAGCCCCGACGAAATCCGCGCGGCCTGCGAAGCCGCGCACGCCTGGGACTTCATCCAGGCCATGCCGGACAAGCTCGACACGCCGATCGGCGAAAACGGCATGCGGCTCTCCGGCGGCCAGCGCCAGCGCATCGCCATCGCGCGGGCGATCCTGAAGAACGCGCCGATCCTCATCCTCGACGAAGCCACCTCGGCGCTCGACAACGAATCCGAACGCCACGTCCAGGCCGCACTCGACACACTGATCGCCAACCGCACCACGCTTGTCATCGCGCACCGGCTGTCCACCATCGAACGTGCCCATCGCATCGTCGTGCTCGAAGGCGGCCGCATCGTCGAAACCGGCACCCACGCCGAGCTCCTGGCCCGACAGGGCCGCTACGCCCAACTGCACGCGCTGCAGTTTTCCGCATGA
PROTEIN sequence
Length: 558
MFALSIVGLVLTAATEPLLPALFKPLLDEGFVGKNEAFMRWVPVLLLALFLVRGVTSFVSTYCMAWVGSRLVMDLRAAMFGKLMTLPTRYFDQNPSGQLIAHLAFNVTQVTQSATSAVTTLVRDSLTVAGLLGYLLWLNWKLTAVVFGMAPLTLWVVRVASKRLRGLSRKAQQNIGELTQVVDEAVDGHRVVKLYGGETYEQGRFLHAANQARLFEMKRVAANAIYEPFVQFLAAVALAIIVYIAADQASEDATTVGGFVAFFMAMLLLFAPLKRLTAVNDQMQRGLAASETIFALLDQDAERDTGTRTPERIEGRLRFRDVTLTYPGKDVPALDRISLDIAPGETVALVGASGSGKTTLANLVPRFYDPDSGQIELDDLDTRDIALQTLRSHIALVSQDVVLFNDTLAHNIAYGSKRDASPDEIRAACEAAHAWDFIQAMPDKLDTPIGENGMRLSGGQRQRIAIARAILKNAPILILDEATSALDNESERHVQAALDTLIANRTTLVIAHRLSTIERAHRIVVLEGGRIVETGTHAELLARQGRYAQLHALQFSA*